Search is not available for this dataset
name stringlengths 18 62 | sequence stringlengths 1 300 | reactivity listlengths 1 300 | seqpos listlengths 1 300 | class stringclasses 5
values | dataset stringclasses 23
values |
|---|---|---|---|---|---|
Huber (2019), ZSIN | CGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGC | [
1.442198,
0.076045,
0.007494,
0.035065,
-0.107028,
-0.137316,
-0.06972099999999999,
0.147974,
0.322092,
0.23841099999999998,
1.60776,
2.325576,
1.070995,
1.3575869999999999,
0.231619,
0.07947599999999999,
0.08891199999999999,
-0.039643,
0.14246,
-0.151578,
0.035153,
0.34025... | [
8525,
8526,
8527,
8528,
8529,
8530,
8531,
8532,
8533,
8534,
8535,
8536,
8537,
8538,
8539,
8540,
8541,
8542,
8543,
8544,
8545,
8546,
8547,
8548,
8549,
8550,
8551,
8552,
8553,
8554,
8555,
8556,
8557,
8558,
8559,
8560,
8561,
8562,
8563,
8564... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | ACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG | [
1.66026,
0.008112,
0.30017000000000005,
0.115853,
0.094523,
0.016479,
0.274769,
0.250821,
0.163215,
0.16968899999999998,
-0.085696,
0.059919,
0.393256,
-0.139399,
0.431289,
0.535041,
0.44314000000000003,
-0.009275,
0.245057,
0.7451869999999999,
-0.160325,
-0.585002999999999... | [
10725,
10726,
10727,
10728,
10729,
10730,
10731,
10732,
10733,
10734,
10735,
10736,
10737,
10738,
10739,
10740,
10741,
10742,
10743,
10744,
10745,
10746,
10747,
10748,
10749,
10750,
10751,
10752,
10753,
10754,
10755,
10756,
10757,
10758,
10759,
1... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | ACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGCCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCA | [
0.218801,
0.222568,
0.084025,
1.244666,
0.365465,
0.146968,
0.7860309999999999,
0.189545,
0.42028099999999996,
0.18595799999999998,
0.134745,
0.20843399999999998,
0.10971299999999999,
-0.09755499999999999,
0.47561000000000003,
0.35669,
0.9698779999999999,
1.704486,
-0.12501199999... | [
2200,
2201,
2202,
2203,
2204,
2205,
2206,
2207,
2208,
2209,
2210,
2211,
2212,
2213,
2214,
2215,
2216,
2217,
2218,
2219,
2220,
2221,
2222,
2223,
2224,
2225,
2226,
2227,
2228,
2229,
2230,
2231,
2232,
2233,
2234,
2235,
2236,
2237,
2238,
2239... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | GGAACAGCTGTTAAGGGAAAGGAGGCTGCACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCACCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAACACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAG | [
0.996923,
0.851243,
0.683632,
0.714737,
0.271269,
0.530723,
-0.010688999999999999,
0.16312000000000001,
0.17632499999999998,
0.314981,
0.379696,
0.406833,
1.33073,
1.708899,
0.522442,
0.243147,
0.5422739999999999,
0.818735,
0.7067979999999999,
0.8529749999999999,
0.1825679999... | [
3025,
3026,
3027,
3028,
3029,
3030,
3031,
3032,
3033,
3034,
3035,
3036,
3037,
3038,
3039,
3040,
3041,
3042,
3043,
3044,
3045,
3046,
3047,
3048,
3049,
3050,
3051,
3052,
3053,
3054,
3055,
3056,
3057,
3058,
3059,
3060,
3061,
3062,
3063,
3064... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | AGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCTGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGTTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTA | [
4.396211,
0.071549,
1.360523,
0.042312999999999996,
0.056219,
0.024957999999999998,
-0.030452,
-0.100615,
0.039629,
0.219213,
0.325335,
0.006572,
0.38930899999999996,
-0.13219599999999998,
0.300022,
0.09014899999999999,
0.060190999999999995,
0.122012,
0.158079,
0.112832,
-0.0... | [
7425,
7426,
7427,
7428,
7429,
7430,
7431,
7432,
7433,
7434,
7435,
7436,
7437,
7438,
7439,
7440,
7441,
7442,
7443,
7444,
7445,
7446,
7447,
7448,
7449,
7450,
7451,
7452,
7453,
7454,
7455,
7456,
7457,
7458,
7459,
7460,
7461,
7462,
7463,
7464... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | CCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATA | [
-0.069851,
0.114087,
0.272299,
0.8734139999999999,
0.11657000000000001,
0.46277799999999997,
0.29419799999999996,
1.322719,
0.858073,
0.226896,
0.06268699999999999,
0.7686379999999999,
0.351221,
-0.038356999999999995,
-0.135121,
-0.0016300000000000002,
0.078466,
0.03416599999999999... | [
7150,
7151,
7152,
7153,
7154,
7155,
7156,
7157,
7158,
7159,
7160,
7161,
7162,
7163,
7164,
7165,
7166,
7167,
7168,
7169,
7170,
7171,
7172,
7173,
7174,
7175,
7176,
7177,
7178,
7179,
7180,
7181,
7182,
7183,
7184,
7185,
7186,
7187,
7188,
7189... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | GTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCCTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAG | [
0.06800199999999999,
-0.064709,
0.152202,
0.43781000000000003,
-0.005240000000000001,
0.163693,
0.141087,
-0.056496,
0.049956999999999994,
0.103143,
0.578919,
0.884679,
0.896787,
0.527876,
0.574344,
0.407948,
0.311427,
0.5633900000000001,
0.21020699999999998,
0.161914,
0.0895... | [
6875,
6876,
6877,
6878,
6879,
6880,
6881,
6882,
6883,
6884,
6885,
6886,
6887,
6888,
6889,
6890,
6891,
6892,
6893,
6894,
6895,
6896,
6897,
6898,
6899,
6900,
6901,
6902,
6903,
6904,
6905,
6906,
6907,
6908,
6909,
6910,
6911,
6912,
6913,
6914... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | CCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGCGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAA | [
-0.23737799999999998,
0.030178999999999997,
-0.06898,
0.6081989999999999,
0.10449599999999999,
-0.093232,
0.020887,
0.239897,
0.124611,
-0.14826699999999998,
1.002455,
0.45226099999999997,
1.161385,
1.087526,
1.383944,
0.24049,
-0.009714,
0.11802599999999999,
0.066456,
-0.01139... | [
6600,
6601,
6602,
6603,
6604,
6605,
6606,
6607,
6608,
6609,
6610,
6611,
6612,
6613,
6614,
6615,
6616,
6617,
6618,
6619,
6620,
6621,
6622,
6623,
6624,
6625,
6626,
6627,
6628,
6629,
6630,
6631,
6632,
6633,
6634,
6635,
6636,
6637,
6638,
6639... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | CCGGCAGAGGTGTGGACCAGATACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTCTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCGGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGACCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGG | [
0.017314,
0.158057,
0.07371699999999999,
0.055507999999999995,
-0.034652999999999996,
0.025092999999999997,
0.175556,
0.303985,
0.224934,
0.523195,
0.904496,
0.570168,
0.43827499999999997,
0.243591,
0.024592,
0.553682,
0.013595999999999999,
0.197205,
0.406702,
0.372214,
0.345... | [
6325,
6326,
6327,
6328,
6329,
6330,
6331,
6332,
6333,
6334,
6335,
6336,
6337,
6338,
6339,
6340,
6341,
6342,
6343,
6344,
6345,
6346,
6347,
6348,
6349,
6350,
6351,
6352,
6353,
6354,
6355,
6356,
6357,
6358,
6359,
6360,
6361,
6362,
6363,
6364... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | CACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATCTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGATACG | [
0.018595999999999998,
0.34033599999999997,
0.261453,
0.08914899999999999,
0.483734,
0.040958999999999995,
-0.045965,
0.007127,
-0.20431000000000002,
0.281831,
0.310177,
0.715753,
0.6213000000000001,
0.680707,
0.325162,
0.30685799999999996,
0.289331,
1.01728,
1.170291,
1.115166,... | [
6050,
6051,
6052,
6053,
6054,
6055,
6056,
6057,
6058,
6059,
6060,
6061,
6062,
6063,
6064,
6065,
6066,
6067,
6068,
6069,
6070,
6071,
6072,
6073,
6074,
6075,
6076,
6077,
6078,
6079,
6080,
6081,
6082,
6083,
6084,
6085,
6086,
6087,
6088,
6089... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | AGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGATGAAGACCATGCACACTGGCTTGAAGCAAGAATGCT | [
0.053224,
0.17026000000000002,
-0.065355,
0.002228,
-0.087945,
-0.096814,
0.169264,
-0.07452199999999999,
0.39336499999999996,
2.609099,
0.6393409999999999,
2.7403049999999998,
1.007696,
1.747679,
3.495528,
0.737332,
1.875954,
0.554711,
1.722627,
1.5924989999999999,
1.089006,... | [
5775,
5776,
5777,
5778,
5779,
5780,
5781,
5782,
5783,
5784,
5785,
5786,
5787,
5788,
5789,
5790,
5791,
5792,
5793,
5794,
5795,
5796,
5797,
5798,
5799,
5800,
5801,
5802,
5803,
5804,
5805,
5806,
5807,
5808,
5809,
5810,
5811,
5812,
5813,
5814... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | TGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAAACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAAAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCC | [
0.33791299999999996,
0.24720199999999998,
0.100866,
0.023011999999999998,
0.008787999999999999,
-0.017987,
0.036961,
0.341437,
0.259718,
-0.120319,
-0.056623,
0.083179,
0.089489,
0.549932,
0.095374,
-0.050824999999999995,
0.06412000000000001,
0.40379899999999996,
0.10288399999999... | [
2475,
2476,
2477,
2478,
2479,
2480,
2481,
2482,
2483,
2484,
2485,
2486,
2487,
2488,
2489,
2490,
2491,
2492,
2493,
2494,
2495,
2496,
2497,
2498,
2499,
2500,
2501,
2502,
2503,
2504,
2505,
2506,
2507,
2508,
2509,
2510,
2511,
2512,
2513,
2514... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | TCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCGGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGACCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACGAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAA | [
0.11130000000000001,
0.217686,
0.288147,
0.049129,
-0.026690000000000002,
0.511815,
2.110288,
0.7370500000000001,
1.484678,
0.233446,
0.029647999999999997,
-0.027573,
0.018675,
0.044010999999999995,
0.088055,
0.027065,
-0.032390999999999996,
-0.102613,
0.0049949999999999994,
-0... | [
5500,
5501,
5502,
5503,
5504,
5505,
5506,
5507,
5508,
5509,
5510,
5511,
5512,
5513,
5514,
5515,
5516,
5517,
5518,
5519,
5520,
5521,
5522,
5523,
5524,
5525,
5526,
5527,
5528,
5529,
5530,
5531,
5532,
5533,
5534,
5535,
5536,
5537,
5538,
5539... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | AAAGGATGGGGACATTGGAGCGGTTGCGCTGGACTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTCTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCG | [
0.8416089999999999,
1.187064,
0.107662,
0.251934,
0.11172399999999999,
-0.005545,
0.066538,
0.11877599999999999,
0.12820099999999998,
0.015175,
-0.104255,
0.127773,
0.8040149999999999,
0.462885,
-0.068581,
0.18254499999999999,
0.114949,
0.036152,
0.141756,
0.024949,
0.2430300... | [
4950,
4951,
4952,
4953,
4954,
4955,
4956,
4957,
4958,
4959,
4960,
4961,
4962,
4963,
4964,
4965,
4966,
4967,
4968,
4969,
4970,
4971,
4972,
4973,
4974,
4975,
4976,
4977,
4978,
4979,
4980,
4981,
4982,
4983,
4984,
4985,
4986,
4987,
4988,
4989... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | ACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTCATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTT | [
0.356564,
-0.02244,
-0.030614,
0.225626,
0.69801,
0.025405,
1.5225629999999999,
0.6146039999999999,
0.638367,
0.11710799999999999,
0.088838,
0.168313,
0.062241,
-0.028791999999999998,
1.193624,
0.529486,
1.79519,
0.133634,
0.233712,
0.5074200000000001,
0.7491939999999999,
0... | [
4675,
4676,
4677,
4678,
4679,
4680,
4681,
4682,
4683,
4684,
4685,
4686,
4687,
4688,
4689,
4690,
4691,
4692,
4693,
4694,
4695,
4696,
4697,
4698,
4699,
4700,
4701,
4702,
4703,
4704,
4705,
4706,
4707,
4708,
4709,
4710,
4711,
4712,
4713,
4714... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | CGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCACTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTTAAAGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACAC | [
1.821898,
0.372233,
0.9714029999999999,
0.505289,
1.743986,
0.17581000000000002,
0.030230999999999997,
0.083771,
0.137098,
0.304732,
0.7023309999999999,
0.310342,
0.459572,
1.171522,
1.426587,
0.408659,
0.520934,
0.574858,
0.374793,
0.12684399999999998,
0.071059,
0.012443,
... | [
4400,
4401,
4402,
4403,
4404,
4405,
4406,
4407,
4408,
4409,
4410,
4411,
4412,
4413,
4414,
4415,
4416,
4417,
4418,
4419,
4420,
4421,
4422,
4423,
4424,
4425,
4426,
4427,
4428,
4429,
4430,
4431,
4432,
4433,
4434,
4435,
4436,
4437,
4438,
4439... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | GGCCCTGGGACTAACCGCTGTGAGGCTAGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCG | [
0.101613,
0.044239,
-0.096472,
-0.126419,
0.006343,
-0.014428999999999999,
0.113942,
-0.065889,
-0.301475,
0.267207,
0.084161,
0.036514,
0.041434,
0.082588,
-0.027978,
-0.022890999999999998,
0.194375,
0.037263,
0.255759,
0.266351,
0.059978,
0.048059,
0.3724,
0.025889,
... | [
4125,
4126,
4127,
4128,
4129,
4130,
4131,
4132,
4133,
4134,
4135,
4136,
4137,
4138,
4139,
4140,
4141,
4142,
4143,
4144,
4145,
4146,
4147,
4148,
4149,
4150,
4151,
4152,
4153,
4154,
4155,
4156,
4157,
4158,
4159,
4160,
4161,
4162,
4163,
4164... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | GCCTTGGCCTCGTGTCTTTTGCAAACTGCGATTTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTCTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTCATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGG | [
0.179144,
0.029554999999999998,
0.145506,
0.033866,
0.508076,
0.153351,
-0.0038529999999999997,
-0.151527,
0.11566399999999999,
0.255119,
0.291547,
0.5116109999999999,
0.594973,
0.366863,
0.13970000000000002,
0.218777,
0.036856,
1.376103,
0.25823,
0.883288,
0.2098749999999999... | [
3850,
3851,
3852,
3853,
3854,
3855,
3856,
3857,
3858,
3859,
3860,
3861,
3862,
3863,
3864,
3865,
3866,
3867,
3868,
3869,
3870,
3871,
3872,
3873,
3874,
3875,
3876,
3877,
3878,
3879,
3880,
3881,
3882,
3883,
3884,
3885,
3886,
3887,
3888,
3889... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | TTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAA | [
0.7380519999999999,
0.039781,
0.480998,
0.148799,
0.12195099999999999,
-0.009211,
0.359378,
0.12764799999999998,
1.339489,
0.8017719999999999,
0.20240899999999998,
0.507976,
0.44812599999999997,
0.073376,
0.269883,
0.656745,
0.647567,
0.536011,
0.6716139999999999,
0.954233,
0... | [
3575,
3576,
3577,
3578,
3579,
3580,
3581,
3582,
3583,
3584,
3585,
3586,
3587,
3588,
3589,
3590,
3591,
3592,
3593,
3594,
3595,
3596,
3597,
3598,
3599,
3600,
3601,
3602,
3603,
3604,
3605,
3606,
3607,
3608,
3609,
3610,
3611,
3612,
3613,
3614... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | GTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCGTCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCT | [
0.980463,
0.329551,
0.18107299999999998,
0.6423059999999999,
1.356777,
1.149889,
0.733248,
1.292325,
0.416464,
0.552074,
0.162278,
0.257036,
-0.011701999999999999,
0.091774,
-0.06956799999999999,
0.019053,
0.136492,
-0.013876999999999999,
0.089486,
0.28034000000000003,
-0.016... | [
3300,
3301,
3302,
3303,
3304,
3305,
3306,
3307,
3308,
3309,
3310,
3311,
3312,
3313,
3314,
3315,
3316,
3317,
3318,
3319,
3320,
3321,
3322,
3323,
3324,
3325,
3326,
3327,
3328,
3329,
3330,
3331,
3332,
3333,
3334,
3335,
3336,
3337,
3338,
3339... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | GTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACTAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGGACAGAAATCGTTGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGG | [
0.45322599999999996,
0.298516,
0.36385,
0.349116,
0.287689,
-0.042665999999999996,
0.178866,
0.422632,
2.100192,
2.054438,
0.20501699999999998,
1.8256759999999999,
0.632173,
0.274723,
0.295662,
1.129164,
0.8399989999999999,
1.683098,
0.315611,
0.225098,
0.353925,
-0.0669449... | [
5225,
5226,
5227,
5228,
5229,
5230,
5231,
5232,
5233,
5234,
5235,
5236,
5237,
5238,
5239,
5240,
5241,
5242,
5243,
5244,
5245,
5246,
5247,
5248,
5249,
5250,
5251,
5252,
5253,
5254,
5255,
5256,
5257,
5258,
5259,
5260,
5261,
5262,
5263,
5264... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | TAAAAAACCCCATGTGGAGAGGTCCACAGAGACTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCTGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGG | [
1.160877,
0.299967,
0.735931,
0.08105000000000001,
0.007851,
0.019164999999999998,
0.6903,
0.050504,
0.148815,
0.009101,
0.000384,
1.3019479999999999,
0.524405,
0.807202,
0.406784,
0.27041000000000004,
0.437407,
1.009796,
-0.024676999999999998,
0.7224379999999999,
0.689794,
... | [
2750,
2751,
2752,
2753,
2754,
2755,
2756,
2757,
2758,
2759,
2760,
2761,
2762,
2763,
2764,
2765,
2766,
2767,
2768,
2769,
2770,
2771,
2772,
2773,
2774,
2775,
2776,
2777,
2778,
2779,
2780,
2781,
2782,
2783,
2784,
2785,
2786,
2787,
2788,
2789... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | ACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCATGTTGGTGC | [
0.815044,
-0.043164999999999995,
0.073796,
0.5975269999999999,
0.080411,
0.41720399999999996,
0.419697,
0.5199309999999999,
-0.008938,
0.045802999999999996,
0.045216,
0.216798,
-0.147204,
-0.078763,
0.210531,
0.837854,
0.084841,
0.36255499999999996,
0.814193,
0.032705,
0.0592... | [
7700,
7701,
7702,
7703,
7704,
7705,
7706,
7707,
7708,
7709,
7710,
7711,
7712,
7713,
7714,
7715,
7716,
7717,
7718,
7719,
7720,
7721,
7722,
7723,
7724,
7725,
7726,
7727,
7728,
7729,
7730,
7731,
7732,
7733,
7734,
7735,
7736,
7737,
7738,
7739... | viral_gRNA | Huber, 2019 in virion |
Huber (2019), ZSIN | GGTCATGAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGA | [
0.0020959999999999998,
0.265938,
-0.072974,
0.206587,
1.538743,
0.787979,
1.578388,
1.149584,
2.522689,
1.268101,
0.12496399999999999,
0.14568799999999998,
-0.10094099999999999,
-0.081901,
0.07987799999999999,
0.17152799999999999,
0.773002,
1.247333,
0.042244,
0.503833,
0.734... | [
7975,
7976,
7977,
7978,
7979,
7980,
7981,
7982,
7983,
7984,
7985,
7986,
7987,
7988,
7989,
7990,
7991,
7992,
7993,
7994,
7995,
7996,
7997,
7998,
7999,
8000,
8001,
8002,
8003,
8004,
8005,
8006,
8007,
8008,
8009,
8010,
8011,
8012,
8013,
8014... | viral_gRNA | Huber, 2019 in virion |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TTAGCACTGAGTGAGAGCGCCACGCTAGTGTACAACGAAAGAGAGTTTGTGAACCGCAAGCTGTACCATATTGCCATGCACGGTCCCGCTAAGAATACAGAAGAGGAGCAGTACAAGGTTACAAAGGCAGAGCTCGCAGAAACAGAGTACGTGTTTGACGTGGACAAGAAGCGATGCGTCAAGAAGGAAGAAGCCTCAGGACTTGTCCTCTCGGGAGAACTGACCAACCCGCCCTATCACGAACTAGCTCTTGAGGGACTGAAGACTCGACCCGCGGTCCCGTACAAGGTTGAAACAATA | [
0.4703,
0.873965,
0.6028669999999999,
0.265659,
0.258053,
0.364861,
0.552852,
0.856687,
0.785341,
0.31907599999999997,
0.367571,
0.6419659999999999,
0.386254,
0.743131,
0.28138599999999997,
0.593679,
0.24274099999999998,
0.815894,
0.24648099999999998,
0.15356,
0.251477,
0.3... | [
1925,
1926,
1927,
1928,
1929,
1930,
1931,
1932,
1933,
1934,
1935,
1936,
1937,
1938,
1939,
1940,
1941,
1942,
1943,
1944,
1945,
1946,
1947,
1948,
1949,
1950,
1951,
1952,
1953,
1954,
1955,
1956,
1957,
1958,
1959,
1960,
1961,
1962,
1963,
1964... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GCACAGACATTAGACTACTCAAGCCTTCCGCCAAGAACGTGCATGTCCCGTACACGCAGGCCGCATCTGGATTCGAGATGTGGAAAAACAACTCAGGCCGCCCACTGCAGGAAACCGCCCCTTTCGGGTGCAAGATTGCAGTCAATCCGCTTCGAGCGGTGGACTGCTCATACGGGAACATTCCCATCTCTATCGACATCCCGAACGCTGCCTTTATCAGGACATCAGATGCACCACTGGTCTCAACAGTCAAATGTGATGTCAGTGAGTGCACTTACTCAGCGGACTTCGGCGGGATGG | [
0.703697,
1.05718,
0.8288059999999999,
0.254857,
0.858514,
1.279592,
0.538996,
0.277806,
0.472012,
0.409883,
1.221212,
0.5756589999999999,
0.574853,
0.436291,
0.29334899999999997,
1.143293,
0.595399,
0.455528,
0.385049,
0.834347,
0.425208,
0.788554,
0.443038,
0.22286000... | [
10725,
10726,
10727,
10728,
10729,
10730,
10731,
10732,
10733,
10734,
10735,
10736,
10737,
10738,
10739,
10740,
10741,
10742,
10743,
10744,
10745,
10746,
10747,
10748,
10749,
10750,
10751,
10752,
10753,
10754,
10755,
10756,
10757,
10758,
10759,
1... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TACTCAGCGGACTTCGGCGGGATGGCTACCCTGCAGTATGTATCCGACCGCGAAGGACAATGCCCTGTACATTCGCATTCGAGCACAGCAACCCTCCAAGAGTCGACAGTTCATGTCCTGGAGAAAGGAGCGGTGACAGTACACTTCAGCACCGCGAGCCCACAGGCGAACTTTATTGTATCGCTGTGTGGTAAGAAGACAACATGCAATGCAGAATGCAAACCACCAGCTGACCATATCGTGAGCACCCCGCACAAAAATGACCAAGAATTCCAAGCCGCCATCTCAAAAACTTCATGG | [
0.8091,
1.162735,
1.794881,
0.314965,
0.535389,
0.572413,
0.17057799999999998,
0.25013399999999997,
0.5185919999999999,
0.7389049999999999,
0.8372269999999999,
0.427108,
0.5908329999999999,
0.658072,
0.406198,
0.48998699999999995,
0.21285,
0.11262000000000001,
0.108855,
0.06472... | [
11000,
11001,
11002,
11003,
11004,
11005,
11006,
11007,
11008,
11009,
11010,
11011,
11012,
11013,
11014,
11015,
11016,
11017,
11018,
11019,
11020,
11021,
11022,
11023,
11024,
11025,
11026,
11027,
11028,
11029,
11030,
11031,
11032,
11033,
11034,
1... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | AGCCGCCATCTCAAAAACTTCATGGAGTTGGCTGTTTGCCCTTTTCGGCGGCGCCTCGTCGCTATTAATTATAGGACTTATGATTTTTGCTTGCAGCATGATGCTGACTAGCACACGAAGATGACCGCTACGCCCCAATGACCCGACCAGCAAAACTCGATGTACTTCCGAGGAACTGATGTGCATAATGCATCAGGCTGGTATATTAGATCCCCGCTTACCGCGGGCAATATAGCAACACCAAAACTCGACGTATTTCCGAGGAAGCGCAGTGCATAATGCTGCGCAGTGTTGCCAAAT | [
0.590747,
0.380173,
0.28102000000000005,
0.190963,
0.133065,
0.27622199999999997,
0.077598,
0.504845,
0.22714499999999999,
0.165603,
0.259086,
0.719112,
0.539266,
1.789275,
0.629715,
0.385635,
0.976764,
0.63488,
0.917608,
1.100372,
0.772624,
0.8274100000000001,
1.824945,
... | [
11275,
11276,
11277,
11278,
11279,
11280,
11281,
11282,
11283,
11284,
11285,
11286,
11287,
11288,
11289,
11290,
11291,
11292,
11293,
11294,
11295,
11296,
11297,
11298,
11299,
11300,
11301,
11302,
11303,
11304,
11305,
11306,
11307,
11308,
11309,
1... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | ATAATGCTGCGCAGTGTTGCCAAATAATCACTATATTAACCATTTATTCAGCGGACGCCAAAACTCAATGTATTTCTGAGGAAGCATGGTGCATAATGCCATGCAGCGTCTGCATAACTTTTTATTATTTCTTTTATTAATCAACAAAATTTTGTTTTTAACATTTC | [
2.269787,
1.528688,
1.488836,
1.408392,
2.321894,
0.11958099999999999,
0.08015499999999999,
0.12785000000000002,
-0.026923,
0.025092999999999997,
0.074905,
0.273161,
0.40297099999999997,
0.032478,
0.135079,
0.102739,
0.290949,
0.24232199999999998,
0.088151,
0.062013,
1.896121... | [
11550,
11551,
11552,
11553,
11554,
11555,
11556,
11557,
11558,
11559,
11560,
11561,
11562,
11563,
11564,
11565,
11566,
11567,
11568,
11569,
11570,
11571,
11572,
11573,
11574,
11575,
11576,
11577,
11578,
11579,
11580,
11581,
11582,
11583,
11584,
1... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TGGAGGGGCTCCAGGCGGACATCGGAGCAGCACTCGTCGAAACCCCGCGCGGTCATGTAAGGATAATACCTCAAGCAAATGACCGTATGATCGGACAGTACATCGTTGTCTCGCCAACCTCTGTGCTGAAGAACGCTAAACTCGCACCAGCACACCCGCTAGCAGACCAGGTTAAGATCATAACGCACTCCGGAAGATCAGGAAGGTATGCAGTCGAACCATACGACGCTAAAGTACTGATGCCAGCAGGAAGTGCCGTACCATGGCCAGAATTCTTAGCACTGAGTGAGAGCGCCACGC | [
0.46960199999999996,
0.27818899999999996,
0.204286,
0.464136,
0.105082,
0.110709,
0.15119000000000002,
0.111021,
0.341717,
0.292859,
0.491988,
0.8841300000000001,
0.6941,
0.069577,
0.041964999999999995,
0.162322,
0.12889699999999998,
0.162461,
0.328505,
0.231425,
0.3123309999... | [
1650,
1651,
1652,
1653,
1654,
1655,
1656,
1657,
1658,
1659,
1660,
1661,
1662,
1663,
1664,
1665,
1666,
1667,
1668,
1669,
1670,
1671,
1672,
1673,
1674,
1675,
1676,
1677,
1678,
1679,
1680,
1681,
1682,
1683,
1684,
1685,
1686,
1687,
1688,
1689... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | ATTGGCGGCGTAGTACACACTATTGAATCAAACAGCCGACCAATTGCACTACCATCACAATGGAGAAGCCAGTAGTTAACGTAGACGTAGACCCGCAGAGTCCGTTTGTCGTGCAACTGCAAAAGAGCTTCCCGCAATTTGAGGTAGTAGCACAGCAGGTCACTCCAAATGACCATGCTAATGCCAGAGCATTTTCGCATCTGGCCAGTAAACTAATCGAGCTGGAGGTTCCTACCACAGCGACGATTTTGGACATAGGCAGCGCACCGGCTCGTAGAATGTTTTCCGAGCACCAGTACC | [
null,
null,
null,
0,
null,
-0.049518,
0.16819,
null,
-0.25584,
-0.11122299999999999,
0.203648,
0.389658,
0.742671,
1.038944,
0.590922,
0.203639,
0.128097,
0.093666,
0.434795,
0.6250089999999999,
1.635479,
1.604561,
0.49085199999999996,
1.805302,
2.218109,
1.841277,
... | [
0,
1,
2,
3,
4,
5,
6,
7,
8,
9,
10,
11,
12,
13,
14,
15,
16,
17,
18,
19,
20,
21,
22,
23,
24,
25,
26,
27,
28,
29,
30,
31,
32,
33,
34,
35,
36,
37,
38,
39,
40,
41,
42,
43,
44,
45,
46,
47,
48,
49,
50,
51,
52,
53,
54... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | AGAATGTTTTCCGAGCACCAGTACCATTGCGTTTGCCCCATGCGTAGTCCAGAAGACCCGGACCGCATGATGAAATATGCCAGCAAACTGGCGGAAAAAGCATGCAAGATTACGAATAAGAACTTGCATGAGAAGATCAAGGACCTCCGGACCGTACTTGATACACCGGATGCTGAAACGCCATCACTCTGCTTCCACAACGATGTTACCTGCAACACGCGTGCCGAGTACTCCGTCATGCAGGACGTGTACATCAACGCACCCGGAACTATTTACCATCAGGCTATGAAAGGCGTGCGG | [
1.700612,
1.089516,
1.041955,
1.205959,
2.478851,
1.919149,
0.128059,
0.5105959999999999,
0.861464,
0.33284199999999997,
0.345807,
0.12314699999999999,
0.227871,
0.13283599999999998,
0.154202,
0.47331399999999996,
0.832085,
1.1493,
0.5767300000000001,
0.675005,
0.967178,
1.... | [
275,
276,
277,
278,
279,
280,
281,
282,
283,
284,
285,
286,
287,
288,
289,
290,
291,
292,
293,
294,
295,
296,
297,
298,
299,
300,
301,
302,
303,
304,
305,
306,
307,
308,
309,
310,
311,
312,
313,
314,
315,
316,
317,
318,
319,
3... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | CCATCAGGCTATGAAAGGCGTGCGGACCCTGTACTGGATTGGCTTCGATACCACCCAGTTCATGTTCTCGGCTATGGCAGGTTCGTACCCTGCGTACAACACCAACTGGGCCGACGAAAAAGTCCTCGAAGCGCGTAACATCGGACTCTGCAGCACAAAGCTGAGTGAAGGCAGGACAGGAAAGTTGTCGATAATGAGGAAGAAGGAGTTGAAGCCCGGGTCACGGGTTTATTTCTCCGTTGGATCGACACTTTACCCAGAACACAGAGCCAGCTTGCAGAGCTGGCATCTTCCATCGGT | [
0.653764,
1.270963,
0.860721,
1.23792,
0.557516,
0.503973,
0.316596,
0.24245499999999998,
0.269552,
1.2661959999999999,
0.909334,
0.8481829999999999,
1.80715,
0.6703819999999999,
0.6774600000000001,
0.49336599999999997,
0.21803299999999998,
0.190796,
0.327666,
0.093603999999999... | [
550,
551,
552,
553,
554,
555,
556,
557,
558,
559,
560,
561,
562,
563,
564,
565,
566,
567,
568,
569,
570,
571,
572,
573,
574,
575,
576,
577,
578,
579,
580,
581,
582,
583,
584,
585,
586,
587,
588,
589,
590,
591,
592,
593,
594,
5... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TGCAGAGCTGGCATCTTCCATCGGTGTTCCACCTGAAAGGAAAGCAGTCGTACACTTGCCGCTGTGATACAGTGGTGAGCTGCGAAGGCTACGTAGTGAAGAAAATCACCATCAGTCCCGGGATCACGGGAGAAACCGTGGGATACGCGGTTACAAACAATAGCGAGGGCTTCTTGCTATGCAAAGTTACCGATACAGTAAAAGGAGAACGGGTATCGTTCCCCGTGTGCACGTATATCCCGGCCACCATATGCGATCAGATGACCGGCATAATGGCCACGGATATCTCACCTGACGATG | [
1.624651,
1.202471,
0.693373,
0.6726679999999999,
0.71086,
0.598947,
0.21415199999999998,
0.407095,
0.09331,
0.049099,
0.16910899999999998,
0.385071,
0.43577899999999997,
0.381206,
0.361058,
0.760678,
0.30964,
0.280203,
0.271606,
0.828581,
0.5638029999999999,
0.986645,
0.... | [
825,
826,
827,
828,
829,
830,
831,
832,
833,
834,
835,
836,
837,
838,
839,
840,
841,
842,
843,
844,
845,
846,
847,
848,
849,
850,
851,
852,
853,
854,
855,
856,
857,
858,
859,
860,
861,
862,
863,
864,
865,
866,
867,
868,
869,
8... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GCCACGGATATCTCACCTGACGATGCACAAAAACTTCTGGTTGGGCTCAACCAGCGAATCGTCATTAACGGTAAGACTAACAGGAACACCAATACCATGCAAAATTACCTTCTGCCAATCATTGCACAAGGGTTCAGCAAATGGGCCAAGGAGCGCAAAGAAGACCTTGACAATGAAAAAATGCTGGGTACCAGAGAGCGCAAGCTTACATATGGCTGCTTGTGGGCGTTTCGCACTAAGAAAGTGCACTCGTTCTATCGCCCACCTGGAACGCAGACCATCGTAAAAGTCCCAGCCTCT | [
0.053600999999999996,
0.11429299999999999,
0.052150999999999996,
0.842961,
0.9628789999999999,
0.025751,
0.074532,
0.329308,
0.115062,
0.624412,
0.21476299999999998,
2.324058,
1.533792,
0.38310299999999997,
1.071936,
0.580652,
0.697253,
0.436724,
0.581741,
0.22275599999999998,
... | [
1100,
1101,
1102,
1103,
1104,
1105,
1106,
1107,
1108,
1109,
1110,
1111,
1112,
1113,
1114,
1115,
1116,
1117,
1118,
1119,
1120,
1121,
1122,
1123,
1124,
1125,
1126,
1127,
1128,
1129,
1130,
1131,
1132,
1133,
1134,
1135,
1136,
1137,
1138,
1139... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GACCATCGTAAAAGTCCCAGCCTCTTTTAGCGCTTTCCCCATGTCATCCGTATGGACTACCTCTTTGCCCATGTCGCTGAGGCAGAAGATAAAATTGGCATTACAACCAAAGAAGGAGGAAAAACTGCTGCAAGTCCCGGAGGAATTAGTCATGGAGGCCAAGGCTGCTTTCGAGGATGCTCAGGAGGAATCCAGAGCGGAGAAGCTCCGAGAAGCACTCCCACCATTAGTGGCAGACAAAGGTATCGAGGCAGCCGCGGAAGTTGTCTGCGAAGTGGAGGGGCTCCAGGCGGACATCGG | [
0.515477,
1.391207,
0.126485,
0.110049,
0.31335399999999997,
0.765421,
1.134726,
1.8079429999999999,
2.009344,
0.303126,
0.372537,
0.35492399999999996,
0.49001599999999995,
0.46142000000000005,
0.275093,
0.07935299999999999,
0.115118,
0.220903,
0.092654,
0.226301,
0.111003999... | [
1375,
1376,
1377,
1378,
1379,
1380,
1381,
1382,
1383,
1384,
1385,
1386,
1387,
1388,
1389,
1390,
1391,
1392,
1393,
1394,
1395,
1396,
1397,
1398,
1399,
1400,
1401,
1402,
1403,
1404,
1405,
1406,
1407,
1408,
1409,
1410,
1411,
1412,
1413,
1414... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TAACCCCGGAGGCACCCTCGTGGTGAAGTCCTACGGTTACGCCGACCGCAATAGTGAGGACGTAGTCACCGCTCTTGCCAGAAAATTTGTCAGAGTGTCTGCAGCGAGGCCAGAGTGCGTCTCAAGCAATACAGAAATGTACCTGATCTTCCGACAACTAGACAACAGCCGCACACGACAATTCACCCCGCATCATCTGAATTGTGTGATTTCGTCCGTGTACGAGGGTACAAGAGACGGAGTTGGAGCCGCACCGTCATACCGCACTAAAAGGGAGAACATTGCTGATTGTCAAGAGGA | [
2.117174,
0.45326099999999997,
0.887274,
0.16344699999999998,
0.16106199999999998,
0.19322,
0.177514,
0.45922199999999996,
0.31243899999999997,
0.311253,
0.153924,
0.138773,
0.27468000000000004,
0.39347299999999996,
0.123453,
0.2082,
0.21808799999999998,
0.473929,
0.5966049999999... | [
3850,
3851,
3852,
3853,
3854,
3855,
3856,
3857,
3858,
3859,
3860,
3861,
3862,
3863,
3864,
3865,
3866,
3867,
3868,
3869,
3870,
3871,
3872,
3873,
3874,
3875,
3876,
3877,
3878,
3879,
3880,
3881,
3882,
3883,
3884,
3885,
3886,
3887,
3888,
3889... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GTCAAAAAATTCTTGAGCCAGTTCAAACACCACTCCGTACTTGTGGTCTCAGAGGAAAAAATTGAAGCTCCCCACAAGAGAATCGAATGGATCGCCCCGATTGGCATAGCCGGCGCTGATAAGAACTACAACCTGGCTTTCGGGTTTCCGCCGCAGGCACGGTACGACCTGGTGTTTATCAATATTGGAACTAAATACAGAAACCATCACTTTCAGCAGTGCGAAGACCATGCGGCGACCTTGAAAACCCTCTCGCGTTCGGCCCTGAACTGCCTTAACCCCGGAGGCACCCTCGTGGTG | [
0.077462,
0.25282499999999997,
0.210315,
-0.054129,
-0.174764,
0.651222,
0.028895999999999998,
0.08344299999999999,
0.847907,
1.002079,
0.408423,
0.782771,
0.848669,
1.301506,
0.434901,
0.40199399999999996,
0.483629,
0.187959,
0.312393,
0.355159,
0.731711,
0.502815999999999... | [
3575,
3576,
3577,
3578,
3579,
3580,
3581,
3582,
3583,
3584,
3585,
3586,
3587,
3588,
3589,
3590,
3591,
3592,
3593,
3594,
3595,
3596,
3597,
3598,
3599,
3600,
3601,
3602,
3603,
3604,
3605,
3606,
3607,
3608,
3609,
3610,
3611,
3612,
3613,
3614... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | AGAGCATCCCGTTAACGTACCATCCTGCCGATTCAGCGAGGCCAGTAGCTCATTGGGACAACAGCCCAGGAACCCGCAAGTATGGGTACGATCACGCCGTTGCCGCCGAACTCTCCCGTAGATTTCCGGTGTTCCAGCTAGCTGGGAAAGGCACACAGCTTGATTTGCAGACGGGCAGAACTAGAGTTATCTCCGCACAGCATAACTTGGTCCCAGTGAACCGCAATCTCCCGCACGCCTTAGTCCCCGAGCACAAGGAGAAACAACCCGGCCCGGTCAAAAAATTCTTGAGCCAGTTCA | [
0.17629899999999998,
0.23832599999999998,
0.330691,
0.46427199999999996,
0.554277,
0.580925,
0.604834,
0.076113,
0.137406,
0.046712,
0.275692,
0.264806,
1.618518,
1.741993,
1.305536,
1.342513,
1.053739,
0.535724,
1.270652,
0.297392,
0.22563799999999998,
0.318479,
0.239132... | [
3300,
3301,
3302,
3303,
3304,
3305,
3306,
3307,
3308,
3309,
3310,
3311,
3312,
3313,
3314,
3315,
3316,
3317,
3318,
3319,
3320,
3321,
3322,
3323,
3324,
3325,
3326,
3327,
3328,
3329,
3330,
3331,
3332,
3333,
3334,
3335,
3336,
3337,
3338,
3339... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | ATCCCTTTTCGACGGAGAGATGGCCCGCTTGGCAGCGGCACAACCCCCGGCAAGTACATGCCCTACGGATGTGCCTATGTCTTTCGGATCGTTTTCCGACGGAGAGATTGAGGAGCTGAGCCGCAGAGTAACCGAGTCTGAGCCCGTCCTGTTTGGGTCATTTGAACCGGGCGAAGTGAACTCAATTATATCGTCCCGATCAGCCGTATCTTTTCCACCACGCAAGCAGAGACGTAGACGCAGGAGCAGGAGGACCGAATACTGACTAACCGGGGTAGGTGGGTACATATTTTCGACGGA | [
0.380048,
0.112202,
0.20311,
0.13766899999999999,
0.057257999999999996,
0.124208,
0.524771,
0.367581,
0.41289699999999996,
0.199736,
0.232986,
0.196621,
0.516057,
0.08821699999999999,
0.138634,
0.509907,
0.61848,
0.495948,
0.141509,
0.520405,
0.360722,
0.093133,
0.052397,... | [
5500,
5501,
5502,
5503,
5504,
5505,
5506,
5507,
5508,
5509,
5510,
5511,
5512,
5513,
5514,
5515,
5516,
5517,
5518,
5519,
5520,
5521,
5522,
5523,
5524,
5525,
5526,
5527,
5528,
5529,
5530,
5531,
5532,
5533,
5534,
5535,
5536,
5537,
5538,
5539... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | ATCATCCTGACATGCTTCCGCGGGTGGGTTAAGCAACTGCAAATCGACTATCCCGGACATGAGGTAATGACAGCCGCGGCCTCACAAGGGCTAACCAGAAAAGGAGTATATGCCGTCCGGCAAAAAGTCAATGAAAACCCGCTGTACGCGATCACATCAGAGCATGTGAACGTGCTGCTCACCCGCACTGAGGACAGGCTAGTATGGAAAACTTTACAGGGCGACCCATGGATTAAGCAGCTCACTAACGTACCAAAAGGAAATTTTCAAGCCACCATCGAGGACTGGGAAGCTGAACAC | [
0.49865000000000004,
0.774901,
0.18015199999999998,
0.502107,
0.25874,
0.124929,
0.14967000000000003,
0.091696,
0.667383,
1.024355,
0.222434,
0.6544800000000001,
1.270638,
0.556142,
0.193068,
0.549109,
0.41496099999999997,
0.257168,
1.001123,
0.11100399999999999,
0.4877189999... | [
2750,
2751,
2752,
2753,
2754,
2755,
2756,
2757,
2758,
2759,
2760,
2761,
2762,
2763,
2764,
2765,
2766,
2767,
2768,
2769,
2770,
2771,
2772,
2773,
2774,
2775,
2776,
2777,
2778,
2779,
2780,
2781,
2782,
2783,
2784,
2785,
2786,
2787,
2788,
2789... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GCATACTGCCGCGATGAAAGTAGGACTACGTATAGTGTACGGGAACACTACCAGTTTCCTAGATGTGTACGTGAACGGAGTCACACCAGGAACGTCTAAAGACCTGAAAGTCATAGCTGGACCAATTTCAGCATCGTTTACACCATTCGATCACAAGGTCGTTATCCATCGCGGCCTGGTGTACAACTATGACTTCCCGGAATACGGAGCGATGAAACCAGGAGCGTTTGGAGACATTCAAGCTACCTCCTTGACTAGCAAAGATCTCATCGCCAGCACAGACATTAGACTACTCAAGCC | [
0.110498,
0.323621,
0.409008,
0.48781,
0.525103,
0.359405,
0.480388,
0.30201,
0.276291,
0.652157,
0.35046299999999997,
0.571386,
0.377316,
0.571419,
1.401801,
0.978775,
0.631935,
0.474149,
0.60414,
0.640344,
1.081724,
1.131035,
0.48433899999999996,
0.5173449999999999,
... | [
10450,
10451,
10452,
10453,
10454,
10455,
10456,
10457,
10458,
10459,
10460,
10461,
10462,
10463,
10464,
10465,
10466,
10467,
10468,
10469,
10470,
10471,
10472,
10473,
10474,
10475,
10476,
10477,
10478,
10479,
10480,
10481,
10482,
10483,
10484,
1... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GTCATGTCCTCGGAGGTTTTGCCTTCCACCAACCAAGAGTACATCACCTGCAAATTCACCACTGTGGTCCCCTCCCCTAAAGTCAAATGCTGCGGCTCCTTGGAATGTCAGCCCGCCGCTCACGCAGACTATACCTGCAAGGTCTTTGGAGGGGTGTACCCCTTCATGTGGGGAGGAGCACAATGTTTTTGCGACAGTGAGAACAGCCAGATGAGTGAGGCGTACGTCGAATTGTCAGCAGATTGCGCGACTGACCACGCGCAGGCGATTAAGGTGCATACTGCCGCGATGAAAGTAGGA | [
0.112207,
0.202845,
0.309456,
0.407006,
0.370085,
0.144456,
0.086948,
-0.069034,
0.112231,
0.10614399999999999,
0.337708,
0.222581,
0.700836,
0.598274,
0.145163,
0.19851000000000002,
0.208863,
0.651851,
1.2779639999999999,
3.024759,
1.001202,
0.12183799999999999,
0.229330... | [
10175,
10176,
10177,
10178,
10179,
10180,
10181,
10182,
10183,
10184,
10185,
10186,
10187,
10188,
10189,
10190,
10191,
10192,
10193,
10194,
10195,
10196,
10197,
10198,
10199,
10200,
10201,
10202,
10203,
10204,
10205,
10206,
10207,
10208,
10209,
1... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GGTCGGCTAATGCTGAAACATTCACCGAGACCATGAGTTACCTATGGTCGAACAGCCAGCCATTCTTCTGGGTCCAGCTGTGTATACCCCTGGCCGCTGTCATCGTTCTAATGCGCTGTTGCTCATGCTGCCTGCCTTTTTTAGTGGTTGCCGGCGCCTACCTGGCGAAGGTAGACGCCTACGAACATGCGACCACTGTTCCAAATGTGCCACAGATACCGTATAAGGCACTTGTTGAAAGGGCAGGGTACGCCCCGCTCAATTTGGAGATTACTGTCATGTCCTCGGAGGTTTTGCCTT | [
0.605179,
0.458107,
0.329325,
0.278959,
0.204252,
0.078163,
0.24781799999999998,
1.184495,
0.8586769999999999,
0.6274489999999999,
0.663582,
0.190328,
0.5065919999999999,
0.451094,
0.464717,
0.542549,
0.7787700000000001,
0.866568,
1.067707,
0.803689,
0.10860299999999999,
1.... | [
9900,
9901,
9902,
9903,
9904,
9905,
9906,
9907,
9908,
9909,
9910,
9911,
9912,
9913,
9914,
9915,
9916,
9917,
9918,
9919,
9920,
9921,
9922,
9923,
9924,
9925,
9926,
9927,
9928,
9929,
9930,
9931,
9932,
9933,
9934,
9935,
9936,
9937,
9938,
9939... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | ATACATATGGGGCAATCACGAACCGGTAAGGGTCTATGCCCAAGAGTCTGCACCAGGAGACCCTCACGGATGGCCACACGAAATAGTACAGCATTACTACCATCGCCATCCTGTGTACACCATCTTAGCCGTCGCATCAGCTGCTGTGGCGATGATGATTGGCGTAACTGTTGCAGCATTATGTGCCTGTAAAGCGCGCCGTGAGTGCCTGACGCCATATGCCCTGGCCCCAAATGCCGTGATTCCAACTTCGCTGGCACTTTTGTGCTGTGTTAGGTCGGCTAATGCTGAAACATTCAC | [
0.775698,
1.400866,
0.760477,
1.58542,
0.9249339999999999,
1.020767,
1.301433,
1.651863,
0.08111499999999999,
-0.034832999999999996,
0.14624299999999998,
0.09464299999999999,
0.18409899999999998,
0.581845,
0.576357,
0.548337,
0.761073,
0.573861,
0.619502,
1.109139,
0.941085,
... | [
9625,
9626,
9627,
9628,
9629,
9630,
9631,
9632,
9633,
9634,
9635,
9636,
9637,
9638,
9639,
9640,
9641,
9642,
9643,
9644,
9645,
9646,
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9648,
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9650,
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9652,
9653,
9654,
9655,
9656,
9657,
9658,
9659,
9660,
9661,
9662,
9663,
9664... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TAGGTGGGTACATATTTTCGACGGACACAGGCCCTGGGCACTTGCAAAAGAAGTCCGTTCTGCAGAACCAGCTTACAGAACCGACCTTGGAGCGCAATGTTCTGGAAAGAATCTACGCCCCGGTGCTCGACACGTCGAAAGAGGAACAGCTCAAACTCAGGTACCAGATGATGCCCACCGAAGCCAACAAAAGCAGGTACCAGTCTAGAAAAGTAGAAAATCAGAAAGCCATAACCACTGAGCGACTGCTTTCAGGGCTACGACTGTATAACTCTGCCACAGATCAGCCAGAATGCTATA | [
0.077306,
0.534279,
-0.012407,
0.106865,
0.244785,
0.054826,
0.159085,
0.171537,
0.537857,
0.6861649999999999,
1.201582,
1.182187,
1.132603,
1.635846,
-0.062593,
0.490044,
0.23701599999999998,
0.289223,
0.263159,
0.14399399999999998,
0.11244399999999999,
0.175727,
0.17672... | [
5775,
5776,
5777,
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5780,
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5807,
5808,
5809,
5810,
5811,
5812,
5813,
5814... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GCCACAGATCAGCCAGAATGCTATAAGATCACCTACCCGAAACCATCGTATTCCAGCAGTGTACCGGCGAACTACTCTGACCCAAAGTTTGCTGTAGCTGTTTGCAACAACTATCTGCATGAGAATTACCCGACGGTAGCATCTTATCAGATCACCGACGAGTACGATGCTTACTTGGATATGGTAGACGGGACAGTCGCTTGCCTAGATACTGCAACTTTTTGCCCCGCCAAGCTTAGAAGTTACCCGAAAAGACACGAGTATAGAGCCCCAAACATCCGCAGTGCGGTTCCATCAGCG | [
0.305357,
0.287454,
0.536552,
0.866524,
0.367975,
0.22005899999999998,
0.769061,
0.663262,
0.754562,
0.190681,
0.237587,
0.315093,
0.757551,
0.38618,
1.021371,
1.459084,
1.148603,
0.635693,
0.861197,
0.43196599999999996,
0.36568,
1.273166,
1.606852,
1.9191529999999999,
... | [
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6078,
6079,
6080,
6081,
6082,
6083,
6084,
6085,
6086,
6087,
6088,
6089... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | CATCCGCAGTGCGGTTCCATCAGCGATGCAGAACACGTTGCAAAACGTGCTCATTGCCGCGACTAAAAGAAACTGCAACGTCACACAAATGCGTGAATTGCCAACACTGGACTCAGCGACATTCAACGTTGAATGCTTTCGAAAATATGCATGTAATGACGAGTATTGGGAGGAGTTTGCCCGAAAGCCAATTAGGATCACTACTGAGTTCGTTACCGCATACGTGGCCAGACTGAAAGGCCCTAAGGCCGCCGCACTGTTCGCAAAGACGCATAATTTGGTCCCATTGCAAGAAGTGCC | [
1.14684,
0.9496819999999999,
0.451851,
1.090299,
0.5035379999999999,
0.138209,
0.161207,
0.27449399999999996,
0.255129,
0.11089199999999999,
0.062494999999999995,
0.37272000000000005,
0.13475399999999998,
0.120873,
0.328405,
0.40534499999999996,
1.078443,
0.21567699999999998,
1.4... | [
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6357,
6358,
6359,
6360,
6361,
6362,
6363,
6364... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | ATTTGGTCCCATTGCAAGAAGTGCCTATGGATAGGTTCGTCATGGACATGAAAAGAGACGTGAAAGTTACACCTGGCACGAAACACACAGAAGAAAGACCGAAAGTACAAGTGATACAAGCCGCAGAACCCCTGGCGACCGCTTACCTGTGCGGGATCCACCGGGAGTTAGTGCGCAGGCTTACAGCCGTCTTGCTACCCAACATTCACACGCTTTTTGACATGTCGGCGGAGGACTTTGATGCAATCATAGCAGAACACTTCAAGCAAGGTGACCCGGTACTGGAGACGGATATCGCCT | [
1.332327,
0.777774,
0.520196,
0.608084,
0.043007,
0.10216499999999999,
0.14196699999999998,
0.06675199999999999,
0.271958,
0.50392,
1.059727,
0.27957000000000004,
0.637367,
0.516531,
0.308035,
0.6168359999999999,
1.106459,
0.679527,
0.42297199999999996,
0.7475700000000001,
0.... | [
6600,
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6627,
6628,
6629,
6630,
6631,
6632,
6633,
6634,
6635,
6636,
6637,
6638,
6639... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | CCGGTACTGGAGACGGATATCGCCTCGTTCGACAAAAGCCAAGACGACGCTATGGCGTTAACTGGCCTGATGATCTTGGAAGACCTGGGTGTGGACCAACCACTACTCGACTTGATCGAGTGCGCCTTTGGAGAAATATCATCCACCCATCTGCCCACGGGTACCCGTTTCAAATTCGGGGCGATGATGAAATCCGGAATGTTCCTCACGCTCTTTGTCAACACAGTTCTGAATGTCGTTATCGCCAGCAGAGTATTGGAGGAGCGGCTTAAAACGTCCAAATGTGCAGCATTTATCGGC | [
0.074449,
0.354288,
0.26039,
0.384198,
1.12711,
0.833885,
0.8253229999999999,
1.084502,
0.738192,
0.471219,
0.535098,
0.502887,
0.162657,
0.314322,
0.34776599999999996,
0.377961,
0.587267,
0.780895,
0.9166900000000001,
0.628598,
0.374901,
0.403005,
0.38115299999999996,
... | [
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6902,
6903,
6904,
6905,
6906,
6907,
6908,
6909,
6910,
6911,
6912,
6913,
6914... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GTCCAAATGTGCAGCATTTATCGGCGACGACAACATCATACACGGAGTAGTATCTGACAAAGAAATGGCTGAGAGGTGTGCCACCTGGCTCAACATGGAGGTTAAGATCATTGACGCAGTCATCGGCGAGAGACCGCCTTACTTCTGCGGTGGATTCATCTTGCAAGATTCGGTTACCTCCACAGCGTGTCGCGTGGCGGACCCCTTGAAAAGGCTGTTTAAGTTGGGTAAACCGCTCCCAGCCGACGACGAGCAAGACGAAGACAGAAGACGCGCTCTGCTAGATGAAACAAAGGCGTG | [
0.649181,
0.08710899999999999,
0.29387199999999997,
0.462053,
0.61033,
1.010752,
0.8388559999999999,
0.612479,
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0.573777,
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0.187682,
0.339543,
0.888513,
0.461175,
0.5342819999999999,
1.742156,
1.386035,
0.913017,
0.75341399999... | [
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7182,
7183,
7184,
7185,
7186,
7187,
7188,
7189... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | CTCTGCTAGATGAAACAAAGGCGTGGTTTAGAGTAGGTATAACAGACACCTTAGCAGTGGCCGTGGCAACTCGGTATGAGGTAGACAACATCACACCTGTCCTGCTGGCATTGAGAACTTTTGCCCAGAGCAAAAGAGCATTTCAAGCCATCAGAGGGGAAATAAAGCATCTCTACGGTGGTCCTAAATAGTCAGCATAGCACATTTCATCTGACTAATACCACAACACCACCACCATGAATAGAGGATTCTTTAACATGCTCGGCCGCCGCCCCTTCCCGGCCCCCACTGCCATGTGGA | [
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0.2164,
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0.781149,
1.665062,
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1.132842,
1.5255,
0.535173,
1.115645,
0.9134559999999999,
0.298643,
0.037737,
0.265559,
0.10154099999999999,
0.31313799999... | [
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7455,
7456,
7457,
7458,
7459,
7460,
7461,
7462,
7463,
7464... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TTCCCGGCCCCCACTGCCATGTGGAGGCCGCGGAGAAGGAGGCAGGCGGCCCCGATGCCTGCCCGCAATGGGCTGGCTTCCCAAATCCAGCAACTGACCACAGCCGTCAGTGCCCTAGTCATTGGACAGGCAACTAGACCTCAAACCCCACGCCCACGCCCGCCGCCGCGCCAGAAGAAGCAGGCGCCAAAGCAACCACCGAAGCCGAAGAAACCAAAAACACAGGAGAAGAAGAAGAAGCAACCTGCAAAACCCAAACCCGGAAAGAGACAACGTATGGCACTCAAGTTGGAGGCCGAC | [
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0.076824,
0.027808,
0.29531199999999996,
-0.006379,
-0.042054,
0.085433,
0.064021,
0.011285,
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0.081893,
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0.123153,
0.06432,
1.115424,
0.987092,
-0.097483,
0.517622,
1.233432,
-0.04002,
-0.039333,
0.127515,
0.057733,
-0.049053,
0.062813,
... | [
7700,
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7705,
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7727,
7728,
7729,
7730,
7731,
7732,
7733,
7734,
7735,
7736,
7737,
7738,
7739... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TTGCAATCGTCAGACCCCGTAAGAAGGTAGTGCTATGCGGAGACCCTAAGCAATGCGGATTCTTCAACATGATGCAACTAAAGGTATATTTCAACCACCCGGAAAAAGACATATGTACCAAGACATTCTACAAGTTTATCTCCCGACGTTGCACACAGCCAGTCACGGCTATTGTATCGACACTGCATTACGATGGAAAAATGAAAACCACAAACCCGTGCAAGAAGAACATCGAAATCGACATTACAGGGGCCACGAAGCCGAAGCCAGGGGACATCATCCTGACATGCTTCCGCGGGT | [
0.232535,
1.8291169999999999,
0.7572209999999999,
0.7707379999999999,
1.012094,
1.205016,
1.142495,
0.39546000000000003,
0.9497819999999999,
0.35145899999999997,
0.321273,
0.711874,
0.234951,
0.98279,
0.182992,
0.148586,
0.029122,
0.330052,
0.8553219999999999,
-0.07676000000000... | [
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2503,
2504,
2505,
2506,
2507,
2508,
2509,
2510,
2511,
2512,
2513,
2514... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | AAGTTACAGTATGCTCCTCCACCCCCCTTCCAAAGTACAAAATCAAGAACGTTCAGAAGGTTCAGTGCACAAAAGTAGTCCTGTTTAACCCGCATACCCCTGCATTCGTTCCCGCCCGTAAGTACATAGAAGCGCCAGAACAGCCTGCAGCTCCGCCTGCACAGGCCGAGGAGGCCCCCGAAGTTGCAGCAACACCAACACCACCTGCAGCTGATAACACCTCGCTTGATGTCACGGACATCTCACTGGACATGGAAGACAGTAGCGAAGGCTCACTCTTTTCGAGCTTTAGCGGATCGG | [
0.291068,
0.460196,
0.922989,
0.639195,
1.682597,
0.958594,
1.00234,
0.312226,
1.390422,
1.351823,
1.031152,
0.976641,
0.289864,
0.319028,
0.326532,
0.269876,
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0.140711,
0.210254,
0.01557,
0.725887,
0.192104,
0.48767299999999997,
0.634208,
0.195318,
0.27939... | [
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4977,
4978,
4979,
4980,
4981,
4982,
4983,
4984,
4985,
4986,
4987,
4988,
4989... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | ATCAAGTCTGTCGCCATCCCACTGCTATCTACAGGCATTTACGCAGCCGGAAAAGACCGCCTTGAAGTATCACTTAACTGCTTGACAACCGCGCTAGATAGAACTGATGCGGACGTAACCATCTACTGCCTGGATAAGAAGTGGAAGGAAAGAATCGACGCGGTGCTCCAACTTAAGGAGTCTGTAACAGAGCTGAAGGATGAGGATATGGAGATCGACGACGAGTTAGTATGGATCCATCCGGACAGTTGCCTGAAGGGAAGAAAGGGATTCAGTACTACAAAAGGAAAGTTGTATTCG | [
0.6913969999999999,
1.129972,
0.6965589999999999,
0.18260099999999999,
0.036406,
0.05247,
-0.01289,
0.077526,
0.25815899999999997,
0.448976,
0.718456,
0.48199499999999995,
0.305098,
0.602911,
0.17895799999999998,
0.9282300000000001,
0.721317,
0.265843,
-0.061657,
0.063425,
0.... | [
4400,
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4410,
4411,
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4413,
4414,
4415,
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4427,
4428,
4429,
4430,
4431,
4432,
4433,
4434,
4435,
4436,
4437,
4438,
4439... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | AGAACATTGCTGATTGTCAAGAGGAAGCAGTTGTCAATGCAGCCAATCCGCTGGGCAGACCAGGCGAAGGAGTCTGCCGTGCCATCTATAAACGTTGGCCGAACAGTTTCACCGATTCAGCCACAGAGACCGGCACCGCAAAACTGACTGTGTGCCAAGGAAAGAAAGTGATCCACGCGGTTGGCCCTGATTTCCGGAAACACCCAGAGGCAGAAGCCCTGAAATTGCTGCAAAACGCCTACCATGCAGTGGCAGACTTAGTAAATGAACATAATATCAAGTCTGTCGCCATCCCACTGC | [
0.802828,
0.604618,
0.523398,
0.7283219999999999,
0.7653449999999999,
1.212159,
0.27663000000000004,
1.06718,
0.21023000000000003,
0.405055,
0.397044,
0.46047099999999996,
0.46856299999999995,
0.545486,
0.599443,
0.495874,
0.324802,
0.9607,
1.243373,
0.9988269999999999,
0.766... | [
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4155,
4156,
4157,
4158,
4159,
4160,
4161,
4162,
4163,
4164... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TATGGCACTCAAGTTGGAGGCCGACAGACTGTTCGACGTCAAAAATGAGGACGGAGATGTCATCGGGCACGCACTGGCCATGGAAGGAAAGGTAATGAAACCACTCCACGTGAAAGGAACTATTGACCACCCTGTGCTATCAAAGCTCAAATTCACCAAGTCGTCAGCATACGACATGGAGTTCGCACAGTTGCCGGTCAACATGAGAAGTGAGGCGTTCACCTACACCAGCGAACACCCTGAAGGGTTTTACAACTGGCACCACGGAGCGGTGCAGTATAGTGGAGGTAGATTTACCAT | [
1.010046,
0.707011,
0.511537,
0.235813,
0.057243999999999996,
0.39822599999999997,
0.39844599999999997,
0.5566369999999999,
0.793083,
0.32723,
0.380999,
1.080197,
0.8139909999999999,
0.371367,
0.796315,
0.468478,
0.33211799999999997,
0.420116,
0.114994,
0.224665,
0.382639,
... | [
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8002,
8003,
8004,
8005,
8006,
8007,
8008,
8009,
8010,
8011,
8012,
8013,
8014... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | AGTATAGTGGAGGTAGATTTACCATCCCCCGCGGAGTAGGAGGCAGAGGAGACAGTGGTCGTCCGATTATGGATAACTCAGGCCGGGTTGTCGCGATAGTCCTCGGAGGGGCTGATGAGGGAACAAGAACTGCCCTTTCGGTCGTCACCTGGAATAGCAAAGGGAAGACAATCAAGACAACCCCGGAAGGGACAGAAGAGTGGTCTGCAGCACCACTGGTCACGGCCATGTGCTTGCTTGGAAACGTGAGCTTCCCATGCAATCGCCCGCCCACATGCTACACCCGCGAACCATCCAGAG | [
0.8407359999999999,
0.5704969999999999,
1.103794,
1.25177,
1.600164,
1.168472,
0.316085,
0.759443,
0.289752,
0.29045899999999997,
0.6058239999999999,
-0.014803,
0.147622,
0.580519,
0.8250609999999999,
0.565346,
1.421148,
0.43831899999999996,
0.5910259999999999,
1.002286,
0.66... | [
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8278,
8279,
8280,
8281,
8282,
8283,
8284,
8285,
8286,
8287,
8288,
8289... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TGCTACACCCGCGAACCATCCAGAGCTCTTGACATCCTTGAAGAGAACGTGAACCACGAGGCCTACGACACCCTGCTCAACGCCATATTGCGGTGCGGATCGTCCGGCAGAAGTAAAAGAAGCGTCACTGACGACTTTACCTTGACCAGCCCGTACTTGGGCACATGCTCGTACTGTCACCATACTGAACCGTGCTTTAGCCCGATTAAGATCGAGCAGGTCTGGGATGAAGCGGACGACAACACCATACGCATACAGACTTCCGCCCAGTTTGGATACGACCAAAGCGGAGCAGCAAGC | [
0.430791,
0.33776,
0.054064999999999995,
1.27674,
0.8324100000000001,
0.53598,
0.671742,
0.13704000000000002,
0.223574,
0.13615000000000002,
0.23571899999999998,
0.319096,
0.386136,
0.831262,
0.7274200000000001,
0.397435,
0.22794799999999998,
0.378237,
0.37232699999999996,
0.32... | [
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8527,
8528,
8529,
8530,
8531,
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8533,
8534,
8535,
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8540,
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8552,
8553,
8554,
8555,
8556,
8557,
8558,
8559,
8560,
8561,
8562,
8563,
8564... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | ATACGACCAAAGCGGAGCAGCAAGCTCAAATAAGTACCGCTACATGTCGCTCGAGCAGGATCATACTGTCAAAGAAGGCACCATGGATGACATCAAGATCAGCACCTCAGGACCGTGTAGAAGGCTTAGCTACAAAGGATACTTTCTCCTCGCGAAGTGTCCTCCAGGGGACAGCGTAACGGTTAGTATAGCGAGTAGCAACTCAGCGACGTCATGCACAATGGCCCGCAAGATAAAACCAAAATTCGTGGGACGGGAAAAATATGACCTACCTCCCGTTCACGGTAAGAAGATTCCTTG | [
0.9469019999999999,
1.019365,
0.8828149999999999,
0.935406,
0.624333,
0.567897,
0.0028409999999999998,
0.788763,
0.283364,
0.443719,
0.631625,
0.61392,
0.479502,
1.025235,
0.27466199999999996,
0.426876,
0.23815499999999998,
0.7747200000000001,
0.384453,
0.21922799999999998,
0... | [
8800,
8801,
8802,
8803,
8804,
8805,
8806,
8807,
8808,
8809,
8810,
8811,
8812,
8813,
8814,
8815,
8816,
8817,
8818,
8819,
8820,
8821,
8822,
8823,
8824,
8825,
8826,
8827,
8828,
8829,
8830,
8831,
8832,
8833,
8834,
8835,
8836,
8837,
8838,
8839... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | CCGTTCACGGTAAGAAGATTCCTTGCACAGTGTACGACCGTCTGAAAGAAACAACCGCCGGCTACATCACTATGCACAGGCCGGGACCGCACGCCTATACGTCCTATCTGGAGGAATCATCAGGGAAAGTCTACGCGAAGCCACCATCCGGAAAGAACATTACGTACGAGTGCAAGTGCGGCGATTACAAGACCGGTACCGTTACGACCCGTACCGAAATCACGGGCTGCACCGCCATCAAGCAGTGCGTCGCCTATAAGAGCGACCAAACGAAGTGGGTCTTCAATTCGCCGGACTTGA | [
0.090432,
-0.04329,
0.08440199999999999,
-0.057017,
0.295889,
0.055961,
0.10976599999999999,
0.21931299999999998,
0.188803,
0.9881949999999999,
1.158025,
1.194382,
1.482558,
1.983898,
0.681948,
0.108485,
0.887046,
1.221902,
0.033766,
0.6401859999999999,
0.276813,
0.385112,
... | [
9075,
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9077,
9078,
9079,
9080,
9081,
9082,
9083,
9084,
9085,
9086,
9087,
9088,
9089,
9090,
9091,
9092,
9093,
9094,
9095,
9096,
9097,
9098,
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9100,
9101,
9102,
9103,
9104,
9105,
9106,
9107,
9108,
9109,
9110,
9111,
9112,
9113,
9114... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TGGGTCTTCAATTCGCCGGACTTGATCAGACATGCCGACCACACGGCCCAAGGGAAATTGCATTTACCTTTCAAGCTGATCCCGAGTACCTGCATGGTCCCTGTTGCCCACGCGCCGAACGTAGTACACGGCTTTAAACACATCAGCCTCCAATTAGACACAGACCACCTGACATTGCTCACCACCAGGAGACTAGGGGCAAATCCGGAACCAACTACTGAATGGATCATCGGAAAGACGGTTAGAAACTTCACCGTCGACCGAGATGGCCTGGAATACATATGGGGCAATCACGAACCG | [
1.361889,
1.068191,
0.16133899999999998,
0.096703,
0.016468999999999998,
0.027458,
0.306708,
0.511525,
0.510282,
0.49800799999999995,
0.906458,
0.266184,
0.28698399999999996,
0.115426,
0.08605499999999999,
0.13922,
0.09487000000000001,
-0.001059,
0.35456899999999997,
0.093083,
... | [
9350,
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9353,
9354,
9355,
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9360,
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9363,
9364,
9365,
9366,
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9369,
9370,
9371,
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9373,
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9375,
9376,
9377,
9378,
9379,
9380,
9381,
9382,
9383,
9384,
9385,
9386,
9387,
9388,
9389... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TACTACAAAAGGAAAGTTGTATTCGTACTTTGAAGGCACCAAATTCCATCAAGCAGCAAAAGATATGGCGGAGATAAAGGTCCTGTTCCCAAATGACCAGGAAAGCAACGAGCAACTGTGTGCCTACATATTGGGGGAGACCATGGAAGCAATCCGCGAAAAATGCCCGGTCGACCACAACCCGTCGTCTAGCCCGCCAAAAACGCTGCCGTGCCTCTGCATGTATGCCATGACGCCAGAAAGGGTCCACAGACTCAGAAGCAACAACGTCAAAGAAGTTACAGTATGCTCCTCCACCCC | [
0.109583,
0.169927,
0.060053999999999996,
0.296245,
0.307025,
0.275287,
0.8072309999999999,
0.771668,
1.468605,
1.172391,
1.068433,
1.155874,
0.398474,
0.629834,
1.07835,
0.9931639999999999,
0.138947,
0.358109,
0.272989,
0.0028109999999999997,
1.413416,
0.504912,
3.163215... | [
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4678,
4679,
4680,
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4682,
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4702,
4703,
4704,
4705,
4706,
4707,
4708,
4709,
4710,
4711,
4712,
4713,
4714... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GGTCCCGTACAAGGTTGAAACAATAGGAGTGATAGGCACACCAGGATCGGGCAAGTCGGCTATCATCAAGTCAACTGTCACGGCACGTGATCTTGTTACCAGCGGAAAGAAAGAAAACTGCCGCGAAATTGAGGCCGATGTGCTACGGCTGAGGGGCATGCAGATCACGTCGAAGACAGTGGATTCGGTTATGCTCAACGGATGCCACAAAGCCGTAGAAGTGCTGTATGTTGACGAAGCGTTCGCGTGCCACGCAGGAGCACTACTTGCCTTGATTGCAATCGTCAGACCCCGTAAGAA | [
0.10896000000000002,
0.066804,
0.106929,
-0.034312999999999996,
0.147677,
0.199262,
0.46196299999999996,
1.586685,
1.495069,
0.8896179999999999,
0.40723499999999996,
0.6274139999999999,
0.45731000000000005,
0.5032329999999999,
0.6549159999999999,
1.448541,
1.56832,
1.065538,
1.22... | [
2200,
2201,
2202,
2203,
2204,
2205,
2206,
2207,
2208,
2209,
2210,
2211,
2212,
2213,
2214,
2215,
2216,
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2227,
2228,
2229,
2230,
2231,
2232,
2233,
2234,
2235,
2236,
2237,
2238,
2239... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | CATCGAGGACTGGGAAGCTGAACACAAGGGAATAATTGCTGCGATAAACAGTCCCGCTCCCCGTACCAATCCGTTCAGCTGCAAGACTAACGTTTGCTGGGCGAAAGCACTGGAACCGATACTGGCCACGGCCGGTATCGTACTTACCGGTTGCCAGTGGAGCGAGCTGTTCCCACAGTTTGCAGATGACAAACCACACTCGGCCATCTACGCCCTGGACGTAATCTGCATTAAGTTTTTCGGCATGGACTTGACAAGCGGACTGTTTTCCAAACAGAGCATCCCGTTAACGTACCATCC | [
0.21603000000000003,
0.702365,
0.729694,
0.716868,
0.27888199999999996,
0.425141,
0.180123,
0.29812099999999997,
0.313146,
0.181362,
0.5609700000000001,
0.15305000000000002,
0.256665,
0.435793,
0.566905,
0.856188,
0.197574,
0.23768899999999998,
0.688798,
1.056435,
1.099602999... | [
3025,
3026,
3027,
3028,
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3040,
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3052,
3053,
3054,
3055,
3056,
3057,
3058,
3059,
3060,
3061,
3062,
3063,
3064... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GTATCATTGCATCTGTCCGATGAGATGTGCGGAAGATCCGGACAGATTGTACAAGTATGCAACTAAGCTGAAGAAAAATTGCAAGGGAATAACTGACAAGGAATTGGACAAGAAAATGAAGGAGCTTGCCGCCGTCATGAGCGACCCTGACCTGGAAACTGAGACTATGTGCCTCCACGACGACGAGTCGTGTCGCTACGAAGGGCAAGTCGCTGTTTACCAGGATGTATACGCAGTTGACGGACCGACAAGTCTCTATCACCAAGCCAACAAGGGAGTTAGAGTCGCCTACTGGATAGG | [
1.893555628,
0.620995248,
1.03360212,
1.245745602,
1.290533216,
1.118726718,
0.111347149,
0.416159094,
0.44594593400000004,
0.09962448400000001,
0.231237921,
0.23147665,
0.0039855870000000005,
0.078050192,
0.020567096,
0.008457292,
0.094356222,
0.403704012,
0.5984865930000001,
... | [
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305,
306,
307,
308,
309,
310,
311,
312,
313,
314,
315,
316,
317,
318,
319,
3... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | CAATGCTATGCTGAAAGAAAACTTTCCGACTGTAGCTTCTTACTGTATTATTCCAGAGTACGATGCCTATCTGGACATGGTTGACGGCGCTTCTTGTTGCTTAGACACTGCCAGTTTTTGCCCTGCGAAGCTGCGCAGCTTTCCAAAGAAACACGCTTATTTGGAACCCACAATACGGTCGGCAGTGCCATCAGCGATTCAGAACACGCTCCAGAACGTCCTGGCAGCTGCCACAAAAAGAAATTGCAACGTCACGCAAATGAGAGAATTGCCCGTATTGGATTCGGCTGCCTTTAATGT | [
0.182748308,
0.403538043,
1.123065323,
1.038753707,
1.264299082,
0.601239072,
1.269327964,
1.328498691,
0.594487355,
0.703482696,
0.6872382810000001,
0.682649755,
0.727920063,
0.300355766,
0.303283766,
0.8282160260000001,
2.024803861,
0.047897515,
2.060726377,
0.445041831000000... | [
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6077,
6078,
6079,
6080,
6081,
6082,
6083,
6084,
6085,
6086,
6087,
6088,
6089... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TATTGGATTCGGCTGCCTTTAATGTGGAATGCTTCAAGAAATATGCGTGCAACAATGAATATTGGGAAACGTTCAAAGAAAACCCCATCAGGCTTACTGAAGAAAATGTGATAAATTACATTACTAAATTAAAAGGACCAAAAGCTGCTGCTCTTTTTGCGAAGACACATAATTTGAATATGTTACAGGACATACCAATGGACAGGTTTGTAATGGACTTAAAGAGGGACGTGAAAGTGACTCCAGGAACAAAACATACTGAAGAACGGCCAAAGGTACAGGTGATACAGGCTGCCGATC | [
0.236313089,
1.415667406,
0.38166271500000004,
0.54573602,
0.43571662600000005,
0.659242163,
0.171172716,
0.6364614980000001,
0.126940532,
0.389910633,
0.29981214100000003,
0.5662238740000001,
0.29615996,
0.566990522,
0.267886568,
0.207843781,
0.141186642,
0.553734081,
0.79458464... | [
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6330,
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6352,
6353,
6354,
6355,
6356,
6357,
6358,
6359,
6360,
6361,
6362,
6363,
6364... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GTACAGGTGATACAGGCTGCCGATCCGCTAGCGACAGCGTACTTGTGCGGAATCCACCGGGAGCTGGTTAGGAGATTGAATGCTGTCCTGCTTCCGAACATCCACACACTGTTTGACATGTCGGCTGAAGACTTTGACGCTATTATTGCCGAGCATTTCCAGCCTGGGGACTGTGTTCTGGAAACTGACATTGCGTCGTTTGATAAAAGTGAGGACGACGCCATGGCTCTGACCGCGCTAATGATTCTGGAAGATCTAGGAGTGGACGCAGAGCTGTTGACGCTGATTGAGGCGGCTTTC | [
0.760594655,
0.622196276,
0.627691742,
1.085379673,
0.8306143180000001,
0.069394413,
0.631552326,
0.551197182,
1.170245714,
0.46712199400000004,
1.135247651,
0.426332001,
0.794944698,
0.277438136,
0.1817054,
0.570564685,
0.050193147,
0.450195245,
0.375353983,
0.500088705,
0.2... | [
6600,
6601,
6602,
6603,
6604,
6605,
6606,
6607,
6608,
6609,
6610,
6611,
6612,
6613,
6614,
6615,
6616,
6617,
6618,
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6620,
6621,
6622,
6623,
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6625,
6626,
6627,
6628,
6629,
6630,
6631,
6632,
6633,
6634,
6635,
6636,
6637,
6638,
6639... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GTTGACGCTGATTGAGGCGGCTTTCGGCGAAATATCATCAATACATTTGCCCACCAAAACTAAATTTAAATTCGGAGCCATGATGAAATCCGGAATGTTCCTCACACTGTTTGTGAACACAGTCATCAACATTGTAATCGCAAGCAGAGTGTTAAGAGAGCGGCTAACCGGATCACCATGTGCAGCATTCATTGGAGATGACAACATCGTGAAAGGAGTCAAATCTGACAAATTAATGGCCGACAGGTGCGCCACTTGGTTGAACATGGAGGTCAAGATCATAGACGCCGTGGTGGGCGA | [
0.813115001,
0.01041707,
0.455696763,
0.116604866,
0.300265396,
0.14128073900000002,
0.18149124600000002,
0.256831038,
0.26123898300000004,
0.43446243300000004,
0.885674375,
0.428593249,
0.271039399,
0.671830522,
0.7769126470000001,
0.585738869,
0.097464541,
0.09485064200000001,
... | [
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6876,
6877,
6878,
6879,
6880,
6881,
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6902,
6903,
6904,
6905,
6906,
6907,
6908,
6909,
6910,
6911,
6912,
6913,
6914... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | AGATCATAGACGCCGTGGTGGGCGAGAAAGCGCCCTATTTCTGTGGAGGGTTTATTTTGTGTGACACCGTGACCGGCACAGCGTGCCGTGTGGCCGACCCCTTAAAAAGGCTGTTTAAGCTTGGCAAACCTTTGGCAGCAGATGATGAACATGACGATGACAGGAGAAGGGCACTACACGAAGAGTCAACACGCTGGAATCGAGTGGGAATTCTTCCAGAGCTGTGTAAGGCAGTAGAATCAAGGTATGAAACCGTAGGAACTTCCATCATAGTTATGGCCATGACTACTCTAGCTAGCA | [
0.854920974,
0.717694362,
0.8332399330000001,
0.8141820510000001,
1.21779846,
0.5116721980000001,
1.250552044,
1.116603921,
1.324930049,
0.448760645,
-0.03456564,
0.507915864,
0.278631149,
0.13170294400000002,
0.13211868100000002,
0.255386752,
0.348707482,
0.408621444,
0.30819895... | [
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7178,
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7180,
7181,
7182,
7183,
7184,
7185,
7186,
7187,
7188,
7189... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | ATGGCCATGACTACTCTAGCTAGCAGTGTCAAATCATTCAGCTACCTGAGAGGGGCCCCTATAACTCTCTACGGCTAACCTGAATGGACTACGACATAGTCTAGTCCGCCAAGATGTTCCCGTTCCAACCAATGTATCCGATGCAGCCAATGCCCTATCGCAATCCATTCGCGGCCCCGCGCAGGCCCTGGTTCCCCAGAACTGACCCTTTTCTGGCGATGCAGGTGCAGGAATTAACCCGCTCGATGGCTAACCTGACGTTCAAGCAACGCCGGGACGCGCCACCTGAGGGGCCACCCG | [
0.8977596050000001,
0.504208673,
0.23157812900000002,
0.029348327,
0.26022881600000003,
0.283443883,
0.573883445,
0.6119542410000001,
0.60025448,
0.453404283,
0.258056361,
0.5510473260000001,
0.591518489,
0.215963389,
0.11688741700000001,
0.65085903,
0.42074684,
0.904163994,
0.83... | [
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7453,
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7455,
7456,
7457,
7458,
7459,
7460,
7461,
7462,
7463,
7464... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GACGCGCCACCTGAGGGGCCACCCGCTAAGAAACCGAAGAGGGAGGCCCCGCAAAAACAGAAAGGGGGAGGCCAAGGGAAGAAGAAGAAGAACCCGGGGAAGAAGAAGGCTAAGACGGGGCCGCCTAATCCGAAGGTACAGAGTGGAAACAAGAAGAAGACCAACAAGAAACCAGGCAAGAGACAGCGCATGGTCATGAAATTGGAATCTGACAAGACATTCCCAATTATGCTGGAAGGGAAGATTAATGGCTATGCTTGCGTGGTCGGAGGGAAGTTATTCAGGCCGATGCACGTGGAA | [
0.338391806,
0.615156616,
1.154452953,
1.105415781,
-0.023743788000000002,
0.39809271300000004,
0.029168947,
0.13458053,
0.451743834,
0.152536425,
0.267680984,
0.23272114300000002,
0.7381329870000001,
0.660877255,
-0.09088521100000001,
-0.19215969300000002,
0.20049132,
-0.006063184... | [
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7728,
7729,
7730,
7731,
7732,
7733,
7734,
7735,
7736,
7737,
7738,
7739... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GTTATTCAGGCCGATGCACGTGGAAGGCAAGATCGACAATGACGTTTTGGCCGCACTTAAGACGAAGAAAGCATCCAAATATGATCTTGAGTATGCAGATGTGCCACAGAACATGCGGGCCGATACATTCAAGTACACCCATGAGAAGCCCCAAGGCTATTACAGCTGGCATCATGGAGCAGTCCAATATGAAAATGGGCGTTTCACGGTGCCAAAAGGAGTTGGGGCCAAGGGAGACAGCGGACGACCCATTCTGGATAATCAGGGACGGGTGGTCGCTATTGTGCTGGGAGGTGTGAA | [
1.569702138,
0.45749636600000004,
0.775338928,
1.86121772,
0.470630168,
0.7202251030000001,
0.136740006,
0.5681906870000001,
0.346325421,
0.28159305100000004,
-0.015996311000000003,
0.055313875000000005,
0.712171365,
0.033019385000000005,
0.6814792310000001,
0.7997565670000001,
0.293... | [
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7995,
7996,
7997,
7998,
7999,
8000,
8001,
8002,
8003,
8004,
8005,
8006,
8007,
8008,
8009,
8010,
8011,
8012,
8013,
8014... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TCGCTATTGTGCTGGGAGGTGTGAATGAAGGATCTAGGACAGCCCTTTCAGTCGTCATGTGGAACGAGAAGGGAGTAACTGTGAAGTATACTCCGGAGAACTGCGAGCAATGGTCACTAGTGACCACCATGTGCCTGCTCGCCAATGTGACGTTCCCATGTGCCCAACCACCAATTTGCTACGACAGAAAACCAGCAGAGACCTTGGCCATGCTCAGCGTTAACGTTGACAACCCGGGCTACGATGAGCTGCTGGAAGCAGCTGTTAAGTGCCCCGGAAGGAAAAGGAGATCTACCGAGG | [
0.13402313200000002,
0.24674063000000002,
0.39889676900000004,
0.034373968000000005,
0.53328418,
2.077907489,
0.830699778,
1.08014171,
1.378101811,
0.16096812,
0.489612806,
0.395937757,
0.266433379,
0.108623783,
0.554095297,
0.39276645200000004,
0.728066659,
0.21979768,
0.0595355... | [
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8255,
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8260,
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8264,
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8278,
8279,
8280,
8281,
8282,
8283,
8284,
8285,
8286,
8287,
8288,
8289... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | ATGGGCGGCGCATGAGAGAAGCCCACACCAATTACCTACCCAAAAATGGAGAAAGTTCACGTTGACATCGAGGAAGACAGCCCATTCCTCAGAGCTTTGCAACGGAGCTTCCCGCAGTTTGAGGTAGAAGCCAAGCAGGTCACTGATAATGACCATGCTAATGCCAGAGCGTTTTCGCATCTGGCTTCAAAACTGATCGAAACGGAGGTGGACCCATCCGACACGATCCTTGACATTGGAAGTGCGCCCGCCCGCAGAATGTATTCTAAGCATAAGTATCATTGCATCTGTCCGATGAGA | [
null,
null,
null,
null,
0.49412655200000005,
-0.225215921,
0.24290334,
-0.09454931600000001,
-0.11489603200000001,
0.133142273,
-0.07656386800000001,
-0.22744529200000002,
0.32327252100000003,
-0.28729586100000004,
0.560976629,
-0.319762492,
0.527116192,
1.281911568,
0.132134317,... | [
0,
1,
2,
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42,
43,
44,
45,
46,
47,
48,
49,
50,
51,
52,
53,
54... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GGAAGGAAAAGGAGATCTACCGAGGAGCTGTTTAAGGAGTACAAGCTAACGCGCCCTTACATGGCCAGATGTATCAGATGTGCCGTTGGGAGCTGCCATAGTCCAATAGCAATCGAGGCAGTGAAGAGTGACGGGCACGACGGCTATGTTAGACTTCAGACTTCCTCGCAGTACGGCCTGGACTCCTCTGGCAACTTAAAAGGAAGGACCATGCGGTATGACATGCACGGGACCATTGAAGAGATACCGCTACATCAAGTGTCACTCCACACATCTCGCCCGTGTCACATTGTGGATGGG | [
0.677239424,
0.9606553440000001,
0.51199262,
2.29475681,
0.9161991370000001,
0.9223190870000001,
0.330021074,
0.8649797850000001,
1.069366064,
0.5938123270000001,
1.287912576,
0.9598130810000001,
1.159207471,
0.8378785830000001,
0.503760124,
0.443555472,
0.164065858,
0.449352303,
... | [
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8553,
8554,
8555,
8556,
8557,
8558,
8559,
8560,
8561,
8562,
8563,
8564... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TTTCCTTGAGCGGCAGTTCAGTCACTGTGACACCTCCTGCTGGGACTAGCGCCCTGGTGGAATGCGAGTGCGGCGGCACAAAGATCTCCGAGACCATCAACACGGCAAAACAGTTCAGCCAGTGCACAAAGAAGGAGCAGTGCAGAGCATATCGATTGCAGAACGACAAATGGGTGTATAATTCTGACAAACTGCCCAAAGCTGCGGGAGCCACCCTAAAAGGAAAATTACACGTCCCATTCTTGCTGGCAGACGGCAAATGTACTGTGCCTCTGGCACCAGAACCTATGATAACCTTCG | [
0.21562751800000002,
0.35157187,
0.549562396,
0.43789959700000003,
0.21379028700000002,
0.705210836,
0.41995057900000005,
1.131730808,
0.20600575200000001,
0.345376666,
0.34581868600000004,
0.40989277300000004,
0.26762892,
0.229638379,
0.522303794,
1.154267238,
0.431211343,
0.67432... | [
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9109,
9110,
9111,
9112,
9113,
9114... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GCACCAGAACCTATGATAACCTTCGGTTTCCGATCAGTGTCACTGAAACTGCACCCTAAGAATCCCACATATTTGACCACTCGCCAACTTGCTGATGAGCCTCATTACACGCACGAGCTCATATCTGAACCAGCTGTTAGGAATTTTACCGTCACTGAAAAGGGGTGGGAGTTTGTATGGGGAAACCACCCGCCGAAAAGGTTTTGGGCACAGGAAACAGCGCCCGGAAATCCACATGGGCTGCCACACGAGGTGATAACTCATTATTACCACAGATACCCTATGTCCACCATCTTGGGT | [
0.24870849800000003,
0.043770699999999996,
0.264892095,
0.286750607,
0.264021938,
0.375001008,
0.849251689,
0.593945111,
0.930319553,
0.11681063,
0.43393452,
1.558300563,
1.953312117,
0.840435055,
3.107051264,
0.7569924010000001,
1.274576914,
0.9256035850000001,
1.394347376,
0.... | [
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9378,
9379,
9380,
9381,
9382,
9383,
9384,
9385,
9386,
9387,
9388,
9389... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | ATACCCTATGTCCACCATCTTGGGTTTGTCAATTTGCGCCGCCATCGTAACCGTTTCTGTTGCAGCGTCCACTTGGCTGTTTTGCAAATCCAGAGTTTCGTGCCTAACTCCTTACCGGCTAACACCCAACGCCAGGATGCCGCTTTGCCTGGCTGTGCTTTGCTGCGCCCGTACTGCCCGGGCCGAGACCACCTGGGAGTCCTTGGATCACCTATGGAACAATAACCAACAGATGTTCTGGATCCAATTGCTGATCCCTCTGGCCGCCTTGATTGTAGTGACTCGCCTGCTCAAGTGCGT | [
0.940028886,
0.944243801,
1.199286435,
0.073174104,
0.019031553,
0.13282491,
0.9061848610000001,
0.707331571,
0.722340654,
0.579121638,
0.154822821,
0.173318517,
0.09599500300000001,
0.453493132,
0.122898426,
0.12520182800000001,
0.675717513,
1.147123415,
0.863200955,
0.6815523... | [
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9660,
9661,
9662,
9663,
9664... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TAGTGACTCGCCTGCTCAAGTGCGTGTGCTGTGTAGTGCCTTTTTTAGTCGTGGCCGGCGCCGCAGGCGCCGGCGCCTACGAGCACGCGACCACGATGCCGAGCCAAGCGGGAATCTCGTATAACACCATAGTCAACAGAGCAGGCTACGCGCCACTCCCTATCAGCATAACACCGACAAAGATCAAGCTGATACCCACAGTGAACTTGGAGTACGTCACCTGCCACTACAAAACAGGAATGGATTCACCAGCCATCAAATGCTGCGGATCTCAGGAATGTACTCCAACTTACAGGCCTG | [
0.494990572,
2.093179225,
0.618933586,
0.126557512,
0.28707982,
0.737947118,
0.33305855100000004,
0.29678667400000003,
0.573215664,
0.35235572,
0.23832303600000002,
0.20333219200000002,
0.35723889999999997,
0.27649632700000004,
0.25277640700000004,
0.33585715,
0.443567396,
0.826946... | [
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9930,
9931,
9932,
9933,
9934,
9935,
9936,
9937,
9938,
9939... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GAATGTACTCCAACTTACAGGCCTGATGAACAGTGCAAAGTCTTCACAGGGGTTTACCCGTTCATGTGGGGAGGCGCATATTGCTTTTGCGACACTGAGAACACCCAAGTCAGCAAGGCCTACGTAATGAAATCTGACGACTGCCTTGCTGATCACGCTGAAGCATACAAAGCGCACACAGCCTCAGTGCAGGCGTTCCTCAACATCACCGTGGGAGAACACTCCATTGTGACCACTGTGTATGTGAATGGAGAAACTCCTGTGAACTTCAATGGGGTCAAATTAACTGCAGGTCCACTT | [
0.45271376500000005,
0.27527819200000003,
0.573863157,
0.540405016,
0.077887395,
0.11520562200000001,
0.18107963700000002,
0.16387785800000002,
0.15990571,
0.24663446400000003,
0.112398888,
0.48549645100000005,
0.433111713,
0.38512411700000004,
0.203004645,
1.966181458,
0.53630599,
... | [
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10209,
1... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GGTCAAATTAACTGCAGGTCCACTTTCCACAGCTTGGACACCTTTTGACCGCAAAATCGTGCAGTATGCCGGGGAGATCTATAATTACGACTTTCCTGAGTATGGGGCAGGACAACCAGGAGCATTTGGAGACATACAATCCAGAACAGTCTCAAGCTCAGATCTGTACGCCAATACCAATCTAGTGCTGCAGAGACCCAAAGCAGGAGCGATCCATGTGCCATACACTCAGGCGCCATCGGGTTTTGAGCAATGGAAGAAAGATAAAGCTCCGTCATTGAAATTCACCGCCCCTTTCGG | [
0.18915152600000001,
0.150833291,
0.083078043,
0.518656868,
0.301717204,
0.380457627,
1.052498917,
1.006353753,
1.708908431,
1.198059262,
0.621791516,
0.946410288,
0.46498760100000003,
0.8327968960000001,
0.23574941600000002,
0.315414552,
0.03110015,
0.23337352200000003,
0.136722... | [
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1... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | CATTGAAATTCACCGCCCCTTTCGGATGCGAAATATATACAAACCCCATTCGCGCCGAAAATTGTGCTGTAGGGTCAATTCCATTAGCCTTTGACATCCCCGACGCCTTGTTCACCAGGGTGTCAGAAACACCGACACTTTCAGCGGCCGAATGCACTCTTAATGAGTGCGTGTATTCATCCGACTTTGGCGGGATCGCCACGGTCAAGTATTCGGCCAGCAAGTCAGGCAAGTGCGCAGTCCATGTGCCATCAGGGACTGCTACCCTAAAAGAAGCAGCAGTCGAGCTAACCGAGCAAG | [
0.431007896,
1.260921204,
0.251308433,
1.117231234,
3.461109638,
0.446616993,
1.189962213,
1.633869621,
1.528344852,
0.772431878,
0.162283809,
0.17941857600000002,
0.14101448800000002,
0.261626647,
0.289290417,
0.287616611,
0.100402376,
0.069658203,
0.005419866000000001,
0.1612... | [
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1... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GCAGCAGTCGAGCTAACCGAGCAAGGGTCGGTGACCATTCATTTCTCGACCGCAAATATCCACCCGGAGTTCAGGCTCCAAATATGCACATCATATGTCACGTGCAAAGGTGATTGTCACCCCCCGAAAGACCACATTGTGACACACCCCCAGTATCACGCCCAAACATTTACAGCCGCGGTGTCAAAAACCGCGTGGACGTGGTTAACATCCCTGCTGGGAGGATCGGCCGTAATTATTATAATTGGCTTAGTGCTGGCTACTATTGTGGCCATGTACGTGCTGACCAACCAGAAACAT | [
0.33403205,
1.162759079,
0.172089706,
0.06429184,
0.31071660500000003,
0.32497818,
0.795676194,
0.407192408,
0.055219898,
0.36524864300000004,
0.031344833,
0.32989513,
0.601856559,
1.003599385,
0.263288466,
1.095971566,
0.670313149,
0.167109283,
0.8229969370000001,
0.2531366300... | [
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11034,
1... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GTACGTGCTGACCAACCAGAAACATAATTGAACATAGCAGCAATTGGCAAGCTGCCTATATTGAACTCGCGGCGATTGGCATGCCGCTTTAAAATTTTATTTTATTTTCTTTTCTTTTCCGAATCGGATTTTGTTTTTAATATTT | [
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0.500282725,
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0.6432358530000001,
0.45420275,
0.12355940800000001,
1.299881285,
0.484775958,
-0.11673227500000001,
0.151288835,
0.727683045,
... | [
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1... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TCGCCCGTGTCACATTGTGGATGGGCATGGTTATTTTCTACTTGCTAGGTGCCCGGCAGGGGACTCCATCACCATGGAATTTAAGAAAAATTCAGTCACACACTCCTGCTCAGTGCCGTATGAAGTGAAATTTAATCCTGTAGGCAGAGAACTCTACACTCATCCCCCAGAACACGGAGCAGAGCAAGCGTGCCAAGTCTACGCGCATGATGCACAGAACAGAGGAGCTTATGTCGAGATGCACCTCCCGGGCTCAGAAGTGGATAGCAGTTTGGTTTCCTTGAGCGGCAGTTCAGTCAC | [
0.6753494360000001,
0.271968674,
0.682226596,
0.150215348,
0.09719401100000001,
0.36553218400000004,
0.199602052,
0.154326294,
0.373227083,
0.45260708600000005,
0.43362367100000004,
0.410760073,
0.282132443,
0.928262044,
0.585954855,
1.703542267,
0.9212122110000001,
0.39675057,
0... | [
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8831,
8832,
8833,
8834,
8835,
8836,
8837,
8838,
8839... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GCGTAAATAGGGTGATTACTAGAGAGGAGCTCGAGGCGCTTACCCCGTCCCGCGCTCCTAGCAGGTCGGCCTCAAGAACTAGCCTGGTATCTAACCCGCCGGGCGTAAATAGGGTGATTACAAGAGAGGAGTTTGAGGCGTTCGTAGCACAACAGCAATGACGGTTTGACGCGGGTGCATACATCTTTTCCTCCGATACCGGTCAAGGGCATTTACAACAAAAATCAGTAAGGCAAACGGTGTTATCCGAAGTGGTGTTGGAGAGGACCGAATTGGAGATTTCGTATGCCCCGCGCCTCG | [
0.251162584,
0.44919319999999996,
1.228695068,
0.99631713,
0.134488352,
0.721682186,
1.278442212,
0.626467427,
0.8601926950000001,
0.136730715,
0.24299423900000003,
0.44843818100000005,
0.235127665,
1.039608804,
0.978418906,
0.611492738,
1.236711935,
1.160660485,
0.83885847200000... | [
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5532,
5533,
5534,
5535,
5536,
5537,
5538,
5539... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GAGATTTCGTATGCCCCGCGCCTCGACCAAGAAAAAGAAGAACTACTACGCAAGAAATTACAGCTGAATCCCACACCTGCTAACAGAAGCAGATACCAGTCCAGGAGGGTGGAGAACATGAAAGCCATAACAGCTAGACGTATTCTGCAAGGCCTAGGGCACTATTTGAAGGCAGAAGGAAAAGTGGAGTGCTATCGAACCCTGCATCCTGTTCCTTTGTATTCATCTAGTGTGAATCGTGCTTTTTCAAGCCCCAAGGTCGCAGTGGAAGCCTGCAATGCTATGCTGAAAGAAAACTTT | [
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0.31840829200000004,
0.416629935,
0.8638403990000001,
0.031619166000000004,
0.21863058400000002,
0.47870602900000003,
0.264188387,
0.074799817,
0.30581077,
0.07310791900000001,
0.164205931,
0.0331... | [
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5800,
5801,
5802,
5803,
5804,
5805,
5806,
5807,
5808,
5809,
5810,
5811,
5812,
5813,
5814... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | AAGATCCAGTGCTCCCAGCCTATACTGTTCTCACCTAAGGTGCCTGCGTACATTCATCCACGGAAGTACCTCGTGGAAACACCACCGGTGGAAGAGAACCAATCCACAGAGGGGACACCTGAACCAGCACCCGTAAACGTGGATGCAACCAGGACTAGAACGCCTGAACCGATCATCATTGAAGAGGAAGAAGAGGATAGTATAAGTTTGCTGTCAGACGGCCCGACCCACCAGGTGCTGCAAGTCGAGGCAGACATTCACGGGCCGCCTTCTGTATCCAGCTCATCCTGGTCCATTCCT | [
2.00948229,
0.40139544400000005,
1.022080592,
0.123525119,
0.2772425,
0.7972923620000001,
0.399983487,
0.44117573600000004,
0.6897327010000001,
0.329734089,
0.264629491,
0.08758958900000001,
0.285761445,
0.096924283,
0.20235118500000002,
0.044990356,
0.23295807300000002,
0.89407083... | [
4950,
4951,
4952,
4953,
4954,
4955,
4956,
4957,
4958,
4959,
4960,
4961,
4962,
4963,
4964,
4965,
4966,
4967,
4968,
4969,
4970,
4971,
4972,
4973,
4974,
4975,
4976,
4977,
4978,
4979,
4980,
4981,
4982,
4983,
4984,
4985,
4986,
4987,
4988,
4989... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GAGTTAGAGTCGCCTACTGGATAGGCTTTGACACCACCCCTTTTATGTTTAAGAACTTGGCTGGAGCATATCCATCATACTCTACCAACTGGGCCGACGAAACCGTGTTAACGGCTCGTAACATAGGCCTGTGCAGCTCCGACGTCATGGAGCGGTCACGTAGAGGGATGTCCATTCTTAGGAAGAAGTATTTGAAACCATCCAATAATGTCCTATTCTCTGTTGGCTCGACCATCTACCACGAGAAGAGGGACTTACTGAGGAGCTGGCACCTGCCGTCTGTATTTCACTTACGTGGCA | [
0.392284187,
2.094971869,
0.532491903,
0.40853616600000003,
2.201960663,
2.170399543,
0.72978427,
0.6390175300000001,
0.452644841,
0.459499264,
0.392769262,
0.33885813800000003,
0.261281327,
0.09270407800000001,
0.49715421600000004,
1.333653931,
2.1599215370000002,
0.34875463900000... | [
550,
551,
552,
553,
554,
555,
556,
557,
558,
559,
560,
561,
562,
563,
564,
565,
566,
567,
568,
569,
570,
571,
572,
573,
574,
575,
576,
577,
578,
579,
580,
581,
582,
583,
584,
585,
586,
587,
588,
589,
590,
591,
592,
593,
594,
5... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | CCGTCTGTATTTCACTTACGTGGCAAGCAAAATTACACATGTCGGTGTGAGACTATAGTTAGTTGCGACGGGTACGTCGTTAAAAGAATAGCTATCAGTCCAGGCCTGTATGGGAAGCCTTCAGGCTATGCTGCCACGATGCACCGCGAGGGATTCTTGTGCTGCAAAGTGACAGACACATTGAACGGGGAGAGGGTCTCTTTTCCCGTGTGCACGTATGTGCCAGCTACATTGTGTGACCAAATGACTGGCATACTGGCAACAGATGTCAGTGCGGACGACGCGCAAAAACTGCTGGTT | [
0.370513435,
0.701151276,
0.367172694,
0.248026242,
0.343018939,
0.098968574,
1.171230717,
0.347258071,
2.511609459,
0.175730662,
0.50315458,
0.5872100840000001,
0.17513809400000002,
0.22634466600000003,
0.279729563,
0.40369272300000003,
1.646222655,
0.919541983,
0.33782198300000... | [
825,
826,
827,
828,
829,
830,
831,
832,
833,
834,
835,
836,
837,
838,
839,
840,
841,
842,
843,
844,
845,
846,
847,
848,
849,
850,
851,
852,
853,
854,
855,
856,
857,
858,
859,
860,
861,
862,
863,
864,
865,
866,
867,
868,
869,
8... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GGACGACGCGCAAAAACTGCTGGTTGGGCTCAACCAGCGCATAGTCGTCAACGGTCGCACCCAAAGAAACACCAATACCATGAAGAATTATCTTTTGCCCGTAGTGGCCCAGGCATTTGCTAGGTGGGCAAAAGAATATAAGGAAGATCAAGAAGATGAGAGGCCACTAGGACTACGAGATAGACAATTAGTTATGGGGTGCTGCTGGGCTTTTAGAAGGCACAAGATAACATCTATTTATAAGCGCCCAGATACCCAAACCATCATCAAAGTGAACAGCGATTTCCACTCATTTGTGCT | [
1.103079826,
0.13548314,
0.11674788700000001,
0.175980981,
0.05621089,
0.366183551,
-0.041949484,
1.019254512,
0.015987932,
0.029782874,
0.679797964,
0.104518469,
0.540685653,
0.495178693,
1.177193418,
0.9778463850000001,
0.30323519600000004,
0.77115941,
0.19853526500000002,
0.... | [
1100,
1101,
1102,
1103,
1104,
1105,
1106,
1107,
1108,
1109,
1110,
1111,
1112,
1113,
1114,
1115,
1116,
1117,
1118,
1119,
1120,
1121,
1122,
1123,
1124,
1125,
1126,
1127,
1128,
1129,
1130,
1131,
1132,
1133,
1134,
1135,
1136,
1137,
1138,
1139... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | ACAGCGATTTCCACTCATTTGTGCTGCCCAGGATAGGCAGTAACACATTGGAGATCGGGCTGAGAACAAGAATCAGGAAAATGCTAGAAGAGCGCAAGGAGCCGTCACCTCTCATTACTGCCGAGGACGTACAAGAAGCTAAGTGCGCAGCCGATGAGGCTAAGGAGGTGCGTGAAGCCGAGGAGTTGCGCGCTGCACTACCACCTTTGGCAGCAGATGTTGAGGAGCCCACTCTGGAAGCCGATGTTGACTTGATGCTACAAGAGGCTGGGGCCGGCTCAGTGGAGACACCTCGTGGCT | [
0.591104819,
0.15862621500000001,
0.20620895,
0.42445301700000004,
0.120115675,
0.22380666200000002,
0.183546019,
-0.19014456,
0.26286795700000004,
0.276866168,
0.7723172060000001,
0.056398947000000005,
1.106324055,
1.617859704,
1.337747136,
0.864377755,
2.293793052,
0.460422347,
... | [
1375,
1376,
1377,
1378,
1379,
1380,
1381,
1382,
1383,
1384,
1385,
1386,
1387,
1388,
1389,
1390,
1391,
1392,
1393,
1394,
1395,
1396,
1397,
1398,
1399,
1400,
1401,
1402,
1403,
1404,
1405,
1406,
1407,
1408,
1409,
1410,
1411,
1412,
1413,
1414... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GGCTCAGTGGAGACACCTCGTGGCTTGATAAAGGTTACCAGCTATGCCGGCGAGGACAAGATCGGCTCTTACGCAGTGCTTTCTCCACAGGCTGTACTCAAGAGTGAGAAACTATCTTGCATTCACCCTCTCGCTGAACAAGTCATAGTGATAACACACTCTGGCCGAAAAGGGCGTTATGCCGTGGAACCCTATCATGGAAAAGTAGTGGTGCCAGAGGGACATGCAATACCCGTCCAGGACTTTCAAGCTCTGAGTGAAAGTGCCACCATTGTGTACAACGAACGAGAGTTCGTAAAC | [
0.323398569,
0.127374602,
0.228839847,
0.25854403,
0.214941067,
0.13600811200000001,
0.7995105770000001,
0.53978791,
0.875341664,
0.9103311190000001,
1.098145928,
1.187841261,
0.42803888900000003,
0.565741253,
0.850925616,
0.26464169400000004,
0.10742525800000001,
0.249392679,
0.... | [
1650,
1651,
1652,
1653,
1654,
1655,
1656,
1657,
1658,
1659,
1660,
1661,
1662,
1663,
1664,
1665,
1666,
1667,
1668,
1669,
1670,
1671,
1672,
1673,
1674,
1675,
1676,
1677,
1678,
1679,
1680,
1681,
1682,
1683,
1684,
1685,
1686,
1687,
1688,
1689... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | GTACAACGAACGAGAGTTCGTAAACAGGTATTTGCACCATATTGCCACACATGGAGGAGCGCTGAACACAGATGAAGAATATTACAAAATTGTCAAGCCCAGCGAGCACGACGGCGAATACCTGTATGATATCGACAGGAAACAGTGCGTCAAGAAAGAACTAGTCACTGGGCTAGGGCTTACAGGCGAGCTGGTGGATCCTCCCTTCCATGAATTCGCCTACGAGAGCCTGAGAACACGACCGGCCGCTCCTTACCAAGTACCAACCATAGGGGTGTATGGCGTGCCGGGTTCAGGCAA | [
0.722520966,
0.43929042500000004,
1.046200056,
0.261409663,
0.21443035500000002,
0.034568012,
-0.102904382,
0.15005300800000002,
0.122411369,
0.279016812,
0.0906763,
0.388564517,
0.324768294,
0.038800898,
0.5592487070000001,
0.052981404,
0.167577473,
0.168158682,
0.254663807,
0... | [
1925,
1926,
1927,
1928,
1929,
1930,
1931,
1932,
1933,
1934,
1935,
1936,
1937,
1938,
1939,
1940,
1941,
1942,
1943,
1944,
1945,
1946,
1947,
1948,
1949,
1950,
1951,
1952,
1953,
1954,
1955,
1956,
1957,
1958,
1959,
1960,
1961,
1962,
1963,
1964... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | TGTATGGCGTGCCGGGTTCAGGCAAGTCTGGCATCATTAAAAGCGCAGTCACCAAAAAAGATCTGGTGGTGAGCGCCAAGAAAGAGAACTGCGCAGAAATAATAAGGGACGTCAAGAAAATGAAAGGGCTGGACGTCAATGCCAGAACTGTGGACTCAGTGCTCTTGAATGGATGCAAACACCCCGTAGAGACCCTGTATATTGACGAAGCTTTTGCTTGTCATGCAGGCACTCTCAGAGCGCTCATAGCCATCATAAGACCTAAAAAGGCAGTGCTCTGCGGGGATCCAAAACAGTGCG | [
1.025727421,
0.7011830290000001,
0.47661501100000003,
0.945997653,
0.558087761,
0.154930188,
0.12122343000000001,
0.408500609,
0.068137477,
0.519685633,
0.202357645,
0.209022289,
0.144699494,
-0.028075944000000002,
0.369906571,
0.097684504,
0.20719389200000002,
1.517101362,
0.083... | [
2200,
2201,
2202,
2203,
2204,
2205,
2206,
2207,
2208,
2209,
2210,
2211,
2212,
2213,
2214,
2215,
2216,
2217,
2218,
2219,
2220,
2221,
2222,
2223,
2224,
2225,
2226,
2227,
2228,
2229,
2230,
2231,
2232,
2233,
2234,
2235,
2236,
2237,
2238,
2239... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | CTCTGCGGGGATCCAAAACAGTGCGGCTTTTTTAACATGATGTGCCTGAAAGTGCATTTTAACCACGAGATTTGCACGCAGGTCTTCCACAAAAGCATCTCTCGTCGTTGCACTAAATCTGTGACTTCGGTCGTCTCAACCTTGTTTTACGACAAAAGAATGAGAACGACGAACCCGAAAGAGACTAAGATTGAGATTGACACTACTGGCAGTACTAAACCAAAGCAGGACGATCTCATTCTCACTTGTTTCAGAGGGTGGGTAAAGCAGTTGCAAATAGATTACAAAGGCAACGAAATA | [
0.22886351900000002,
0.264407114,
0.23108819500000002,
0.26535959400000003,
0.46974592400000004,
0.33626725100000004,
0.33890704800000004,
0.23066228800000002,
0.206224669,
0.043729312,
0.400620362,
0.37204594700000004,
0.29571674800000003,
0.430989657,
0.13684626600000002,
0.659172974... | [
2475,
2476,
2477,
2478,
2479,
2480,
2481,
2482,
2483,
2484,
2485,
2486,
2487,
2488,
2489,
2490,
2491,
2492,
2493,
2494,
2495,
2496,
2497,
2498,
2499,
2500,
2501,
2502,
2503,
2504,
2505,
2506,
2507,
2508,
2509,
2510,
2511,
2512,
2513,
2514... | viral_gRNA | Kutchko,2018 |
Kutchko,2018 alphavirus SHAPE(1M7) SSII-Mn(2+) Mut. | AATAGATTACAAAGGCAACGAAATAATGACGGCAGCCGCCTCTCAAGGGCTGACCCGTAAAGGCGTGTATGCCGTTCGGTACAAGGTGAATGAAAATCCCCTGTACGCACCCACCTCAGAACATGTGAACGTCCTACTGACCCGTACGGAGGACCGTATCGTGTGGAAAACACTAGCCGGCGATCCATGGATAAAAACACTGACGGCCAAGTATCCTGGGAATTTCACTGCCACGATAGAGGAATGGCAAGCAGAGCATGAGGCCATCATGAGGCACATCTTGGAGAGACCGGACCCTAC | [
0.32415524,
1.677291045,
2.286043951,
1.512464042,
4.4097363640000005,
2.068719669,
0.26966007200000003,
1.264008834,
1.503007575,
1.611899651,
0.8899588570000001,
0.450372818,
0.507004401,
1.096363041,
0.125668117,
0.28258453,
0.178738176,
0.138435531,
0.13414362700000002,
1.2... | [
2750,
2751,
2752,
2753,
2754,
2755,
2756,
2757,
2758,
2759,
2760,
2761,
2762,
2763,
2764,
2765,
2766,
2767,
2768,
2769,
2770,
2771,
2772,
2773,
2774,
2775,
2776,
2777,
2778,
2779,
2780,
2781,
2782,
2783,
2784,
2785,
2786,
2787,
2788,
2789... | viral_gRNA | Kutchko,2018 |
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